Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0733 ATGTTAGAGGATATTGAATCATCTAAAATGGGTTTTGGTCGAACTTCGACCTCGAGAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGCTGGAGGAAGAAACAAAGTGAAGGCTCAGAAAGTTTCCTCCACAAAGTTTGTTGCAGCACTCACTTGTCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTGTATTACATGGGGCCTTCCATTGATTTAAGAACCAAACCAGAGTTCACATGGGCTACCAAAATTGCCCAACAGTGGAAACAACTTATGATCACACCCCACGTTATTGGCCGCTACCAAGAAGCTGCTTCCTCTCTCGTCATGGAGGGTGTTCTTCCCACAAGTCCGTCACAAGTGTGTGAGAATGAGAAGATAGACTTCCAGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGTTAAAGAGAGATTTATACGATGAGGTGTTGAACTTCCAAAGCAAAACATTTGGCACTGAGACTCTTCAGGAGCTGATGGCAATGAAATCTAAATGGGACTTGAAGGGTCCAAACAGCCCAAAAATCACTGTGTTGCTGAACCACTTCAAGAGAAAGACACTTTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTTCCTTTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCATTGAGGAGAATTGTGGAGACCTATAATGACTCAAGAATCAACTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTTTACGTTATTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGATTTTGGCACACGTGGCTGGGACAGAAAAATACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTCACGTTTCCAAGTTACAGAAAATTTCGATCTAAGGAAGCAGGATTGTATTTACCCGATCCTGCTTACGATATCACAGTTGATAAAATTGTGCAGGTGGATTTTCTATCTAGTTCATGGTTTCTCTCTGCTGATCTTGTTAAGACACTGTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGCTCCTTTGTTCTTCCAGTAGACCCTAAGGACAAGGAAACTTGGGGAGATAGTGAACACAGGCTTGCATATGTATCTGAAACCACAGTGATTTTCAAGGACATAGTTCAGGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACTGGTTATGTGACTCAGTGGGCTGCAATGTACCCACAGAAAGTTGATGCACTCTTCTATGCTCACTCGGTTGATGAAGTGAAAGTGCTGGCACCACTTCTTGAAAAATTTAGGTCCACAGTTGGCAAGAAGGCCTACATCGTTGTCTCTGGAGGCAGTTTCTGCACTTGTGAAGATGCTGCAACAGCTCTCAAATGGCCTACAATGGTCTGCAAAGAACGTCGATTCAAGATTTTTGATTTGGCCATTGGATCACTTTCTGGGGTATCAGACTCAGAGGCACCAGTGATACACGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTAACCCTCATGTGAGAAAAGCTCTTAAGATGGCCTCAGAAACCAACTCAAATGCTACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGATTTCTGTGAACATCATCACCCAAAACAGAGCCAATTCACTAACAAGGCTTCTGAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAGGGTAGATGAAGAAACTATAAGAGTAGTAGGTTCATTTGAGTGGCCTCACGGACCCAAAACCCTGAGAAGGAGAATAATCCAAGGTGGTCTCATTCGTGCTGTGAGTGAAAGTTGGTATCCATCATCAGATGATGACTTTGGTCTCCTACTGGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCTTACCACTATGACCCTCAAGTTTCTCTCCCAGAGCTCTCTTCCATCTCCCTCTACACTCCAAAGCTTGTTGAAGTTGTCAAAGAGAGACCAAAATGGAATGCCACAGAATTCTTCAAACACATTCACCCCAACACACCTTACCTTCACCAATTACCATGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAATCCAACCCTGTTCAAATTCCAAAATCTAGAACAAACGGATGGCAGGCTTCATGGAAGAAGTTCCTGATAGACATGATGTACCTCAGAGGGTATGTCAGTCTCTACCCAAATTTCCCTCAACAAGCAAGCTTTTCAACCAACCATATGGAGCCAGGGGCACATATCAGTGCAAAAGACAACGTTGTTAAGCATAACATACAGGACTTTGAGGTGCCACTATTGAAAGAAGACTTCAGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTCCCATCTTTAAACCTCTTCAATCAACCAGTTTCTCTGAAGGGTCTCAAAGCTGCTGGAGCTAAGCTGGGACAGGATGTGCTGAGATGCAACAATGCCACTGAGGTTGTGGCTGTTGATCAAGACACGGGTCTACCTCGTACCTGCTCCAAATTCTGA 2826 0.4345 MLEDIESSKMGFGRTSTSRSGDYLEGMLNDYAGGRNKVKAQKVSSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVIGRYQEAASSLVMEGVLPTSPSQVCENEKIDFQQKKSNDVQMIKLKRDLYDEVLNFQSKTFGTETLQELMAMKSKWDLKGPNSPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVETYNDSRINFISSSYDFKYYGRFQMALQTEADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKVDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCTCEDAATALKWPTMVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADINPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSRVDEETIRVVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNIQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNATEVVAVDQDTGLPRTCSKF* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0733 941 SUPERFAMILY Nucleotide-diphospho-sugar transferases 185 385 IPR029044 -
Vra2g0733 941 SUPERFAMILY Nucleotide-diphospho-sugar transferases 605 796 IPR029044 -
Vra2g0733 941 CDD Glyco_tranf_GTA_type 197 288 - -
Vra2g0733 941 PANTHER GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 36 941 - -
Vra2g0733 941 PANTHER OSJNBA0004B13.7 PROTEIN 36 941 - -
Vra2g0733 941 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 169 394 IPR029044 -
Vra2g0733 941 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 607 856 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0733 Vra-Chr2 6315667 6320402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0733 - - gsj:114374559 1785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0733 2 6315667 6320402 Vra2g0733 2 6315667 6320402 ECH