Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0716 ATGAATGGTTCTGCGCAAGGACTGCTTCTTCTCAACACCAGTTTCTTTTCCAATTTCTCCTTCCGAGGGTTTTGCAGGTTGTCAGTTGTTCGACGTTCGCAGCAGTGTCACGGGCTGAGAAGAGGTTTCTCGAAAAGCATGGCTTGCAGTGTGGAAAATTGTGATATGGGTAGTGGGGTGGTTCATCCAGCCACGGATGCTTATGCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAAGTTATAGCAGTACCCACCGATACACTCTATGGGTTTGCTTGTGATGCTTGCTCATTGGAAGCGATTAACAGGATTTATGAGATCAAAGGCCGTAGACATACAAGCCCTCTGGCTATTTGTGTTGGCGACGTATCAGACATAACCCGTTTTGCTGTCACTGACCATTTACCTCATGGTCTGCTTGATTCCCTCCTACCCGGGCCTGTTACAGTTGTACTAAAACGAGGAGAGTCAAGTGTTCTTGAACAATCTTTGAACCCAGGATTGGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATCAGGACCATTGCCCGTGCTTCAGAAACTGCTCTAGCCCTCACTAGTGCAAACTTAAGTGGACAGCCAAGTAGTCTTTCCACCAAAGATTTTGAGAACCTCTGGGAACACTGTGCTTTTGTTTATGATGGTGGTTTGATTCCATCAAGTCGTGCTGGTTCTACAGTTGTGGACCTCACTACACCCCAAAGATACAGAATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATTCTTTCGTTGAGACAGTGACCTCTTAA 822 0.4611 MNGSAQGLLLLNTSFFSNFSFRGFCRLSVVRRSQQCHGLRRGFSKSMACSVENCDMGSGVVHPATDAYAGEAVEALKAGKVIAVPTDTLYGFACDACSLEAINRIYEIKGRRHTSPLAICVGDVSDITRFAVTDHLPHGLLDSLLPGPVTVVLKRGESSVLEQSLNPGLDSIGVRVPDCNFIRTIARASETALALTSANLSGQPSSLSTKDFENLWEHCAFVYDGGLIPSSRAGSTVVDLTTPQRYRILRPGSAKEETVAILEKHSFVETVTS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0716 273 Gene3D DHBP synthase 61 265 - -
Vra2g0716 273 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 22 270 - -
Vra2g0716 273 Pfam Telomere recombination 74 252 IPR006070 GO:0003725
Vra2g0716 273 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 71 259 IPR006070 GO:0003725
Vra2g0716 273 SUPERFAMILY YrdC/RibB 69 258 IPR017945 -
Vra2g0716 273 ProSiteProfiles YrdC-like domain profile. 66 254 IPR006070 GO:0003725
Vra2g0716 273 PANTHER SUA5 22 270 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0716 K07566 - gmx:100791087 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0716 2 6143550 6147373 Vra2g0716 2 6143550 6147373 ECH