Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0713 ATGGCTCAGGGGAAGATAATTGCACAAGAAATATCAAAGAAAATGGTGACATGGAACAGAATTGAGAAGAGGGACATCATAAGCACCATGCCAAATGAGATCGTTGCAAATGTTCTGTCTCGGTTGACATTGAAAGAAGCTGCTAGAACTAGCGTGTTGTCAACTACATGGAGATATCAATGGACCTATTTCTCTGGGGACTTGAACTTTGATAATTCTCTCAGGACTCTTCTCTTGCGTCATGAGAATGTTGGACTTTTGACCAAGTGCAAAGTTTTTGTTCGTGAGTGGGAGATGTTCATGAGCCTTTTGCAACATGTGATGAAATCGTTGAAATGTCACTCCATGCATGGACTCAGAATCTGCATGGATTTGGGCAACCCTTGGAAGGTGACTGAGTGGGTGAAGTTTGCTGCAGAAAAGAATGTTGAAACTTTGGACCTGGATTTTTCATACAATTTCATGGAACCATTCTTTGAAATAAGTGAGAATATTCGAAATGTGTTGTCAAAGAGTTTTGAAATGAGGGTACTGAGAGTCCTTCGTTTGGCTTCTGTGGACGTGAGTGCTGGGATCATTGAGAGTTTTCTAGCATCTTCTCCAGTGCTTGAAACATTATCCGTCAGAGGATCAAAAAGCGTTGTGAGCTTGAAAATTCAGGGTCAAGGACTGAGGTTAAAGCATTTGGAGTTGGTTGAATGTCATATTTTGCATCTTCATATCTGTGCTGAAAATCTCATGACATTTACTTACACCGGAGATTATGGAAATTTTAACTTTGAAACTGTTCCAAACCTTGTGGAAGTCTCCTTTGGAGGAAAATATTGTAATTACCTGCTATCGAACATGCAAGATGCTGAACTTTATGCAGTACTTTCGCAGGTTCATGTTCTGAAATTGGAACTGTTTATACTCTATGGGGGAATTCTTGAAGATCTTCCTGTGTTAAGTAATGTGAAAAACCTGGAACTACGAGTTCGTCACAGGTGTGGAGGGGAACTTGGTCGTACTGTTTCATTACTGAGTGCATTCCCTTCAATAACTGTGCTTAAGATTAAGTTCGTGAGGACCACTATCTGGGAATTGGATGAGGGGTGGAAGGCCAATCTGAAGCATGAGTATCCAAACCTGAGGGAGCTGGAAGTGTCTGGGTACAGAAGAGACACCTGTCAAATTGAGTTGCTGATCAGCATATTTAAAAAGGCACCAAATCTCAACAGGATTGTTGTGGATCCCTTGGCTTCAATGCATGTGCAAAGATCACCTGATGTCAAGGCCAGCATTAGAGAAACGCAACGTGATATGACCATATGGTATGTTGATGCTCTCAAACCTCATGTGTCTCCTTCAACTCAGTTGATCGTCCTCTAA 1371 0.4143 MAQGKIIAQEISKKMVTWNRIEKRDIISTMPNEIVANVLSRLTLKEAARTSVLSTTWRYQWTYFSGDLNFDNSLRTLLLRHENVGLLTKCKVFVREWEMFMSLLQHVMKSLKCHSMHGLRICMDLGNPWKVTEWVKFAAEKNVETLDLDFSYNFMEPFFEISENIRNVLSKSFEMRVLRVLRLASVDVSAGIIESFLASSPVLETLSVRGSKSVVSLKIQGQGLRLKHLELVECHILHLHICAENLMTFTYTGDYGNFNFETVPNLVEVSFGGKYCNYLLSNMQDAELYAVLSQVHVLKLELFILYGGILEDLPVLSNVKNLELRVRHRCGGELGRTVSLLSAFPSITVLKIKFVRTTIWELDEGWKANLKHEYPNLRELEVSGYRRDTCQIELLISIFKKAPNLNRIVVDPLASMHVQRSPDVKASIRETQRDMTIWYVDALKPHVSPSTQLIVL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0713 456 Gene3D Ribonuclease Inhibitor 93 427 IPR032675 -
Vra2g0713 456 SUPERFAMILY F-box domain 23 65 IPR036047 GO:0005515
Vra2g0713 456 Pfam F-box domain 27 59 IPR001810 GO:0005515
Vra2g0713 456 Gene3D - 7 62 - -
Vra2g0713 456 PANTHER F-BOX PROTEIN-LIKE 10 415 - -
Vra2g0713 456 SUPERFAMILY RNI-like 144 386 - -
Vra2g0713 456 PANTHER - 10 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0713 Vra-Chr2 6103608 6109443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0713 25 206 EF-hand Containing Proteins AT5G41840 27.368 4.37e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0713 - - gmx:100778140 552.362