Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0712 ATGACAAAGAAAATACGCTTGGCTTGTTCCTTGCAGGAGGATGAAGAGAAAGGGAATAATAGCTTTGTGGAAATGGATACAAGGGTAGGAGGTAATGATGGTTTTCCTAGAATTGGACCAAATGATTCGCTTCTCCCTGGTCTTTTTGATGATGTTGCGCTAAACTGTCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTAGCATGTATAAATAAAAGGTACAACATGTTGATTAGGAGTGGGTATCTATCCGGGTTGAGGAAGAAGTTGGGGATTGTGGAGCTTGAGCATTTGGTTTATTTGGTTTGTGATCCAAGAGGGTGGGAGGCATTTGACCCCAAGAGAAATAGATGGATAACATTACCTAAAATACCTTGTGATGAGTGTTTTAATCATGCAGACAAGGAGTCCTTGGCTGTGGGGAGTGAATTGTTGGTGTTTGGTCGGGAATTGATGGATTTTGCCATTTGGAAGTACAGCTTGATTTGCCGTGGTTGGGTGAAGTGTCAGGAGATGAACCGACCTCGATGCTTGTTCGCATCTGGCAGTCTTGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAATATGGAAATGTTCTTGAATCCGCCGAGTTGTATGACTCTTCTTCAGGTACATGGGAACTTTTGCCGAACATGCACACACCACGTAGATTGTGCTCTGGTTTTTTCATGGATGGCAAGTTCTATGTGATCGGTGGCATGTCAAGTCCTACTGTTTCATTGACTTGTGGAGAAGAGTATGATCTTAAGACAAGAAACTGGCGGAAAATAGAGGGTATGTATCCATATGTTAATGGGGCTGCTCAGGCTCCTCCACTTGTGGCAGTTGTGGATAATGAGTTATACGCAGTTGAGCATCTTACCAACATGGTGAAGAAATATGACAAGGAAAATAACAGTTGGAGTGAATTGGGAAGACTTCCAGTTCGGGCCGATTCTTCAAATGGATGGGGCCTGGCTTTCAAGGCTTGTGCAGAGAAGCTTCTGGTTGTGGGTGGGCAAAGGGGTCCAGAAGGTGAAGCTGTTGTACTGAACTCATGGTGTCCTAGGACAGGGGTCAGGAATGGAACCATAGATTGGCAAGTACTTGGTGTTAAGGAGCATGTCGGGGTGTTTGTTTACAATTGTGCTGTTATGGGATGGTCTGGTGAGATGCTTCTTGATTGA 1194 0.4414 MTKKIRLACSLQEDEEKGNNSFVEMDTRVGGNDGFPRIGPNDSLLPGLFDDVALNCLAWVSRSDYASLACINKRYNMLIRSGYLSGLRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLICRGWVKCQEMNRPRCLFASGSLGSIAIVAGGSDKYGNVLESAELYDSSSGTWELLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLKTRNWRKIEGMYPYVNGAAQAPPLVAVVDNELYAVEHLTNMVKKYDKENNSWSELGRLPVRADSSNGWGLAFKACAEKLLVVGGQRGPEGEAVVLNSWCPRTGVRNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMLLD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0712 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 33 389 - -
Vra2g0712 397 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 33 389 - -
Vra2g0712 397 SUPERFAMILY Kelch motif 108 347 IPR015915 GO:0005515
Vra2g0712 397 SMART kelc_smart 188 235 IPR006652 GO:0005515
Vra2g0712 397 SMART kelc_smart 236 288 IPR006652 GO:0005515
Vra2g0712 397 Pfam Kelch motif 224 269 IPR006652 GO:0005515
Vra2g0712 397 Pfam Kelch motif 176 221 IPR006652 GO:0005515
Vra2g0712 397 Gene3D - 100 374 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0712 Vra-Chr2 6101278 6103490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0712 48 267 Miscellaneous Gene Families AT4G33900 26.364 2.39e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0712 - - vun:114169266 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0712 2 6101278 6103490 Vra2g0712 2 6101278 6103490 ECH