Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0710 ATGACGATGCAAAAGCAATCTCTCTTCTCCTTCTCACTAGCTTTGCTAGTTTCATTTTTGTATTTCACCAACTCTTCAGCTCAGTTATCACCGGCTGCTTCCCCTCTAAAACCACCCCAATCTACCCCTACACCACCAGCTGCAGCCCCTAAACCATTGGTTCCCTCGTTGCCAGAGTCACCAAGTGATGCAACCCCTGACACTGCAGCAGCTGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATCCTTATCCGTCTCATGAAAACCACTCAATTGATCAACCAACTCAATGCACAGCTCCTCACCACTAAGTCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCTGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGAGTATGTGTCTAGCTCCAACTTTGATACTTTAACCAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTATGGAGGGAGTGTGAATATCTCAACAGGGGAGGTTAACACCACCATCACTGGCATTGTATACACAGATAAGCATCTTGCTATTTATAAGGTAGGAAAAGTGCTTCTTCCTATGGACTTCTTTACAGTGGCCAAGGCACCTGCAAAGTCACCCTCTTTAGCACCAGAACCATCTGCAAAGGCTCCTAAAGCAGATAAGGAAAATTCACTGTCCCCAGACTCCTCAGAATCATCTCAGATTAATTCCACAAAGGATAACTCTGGCACAGTGAAAACCATTGTGTATGGAAAGTGGCTGTCCCTTGTTCTTGGAGTAATTCTCGTGACTGTTTTCTCATCATAA 882 0.4535 MTMQKQSLFSFSLALLVSFLYFTNSSAQLSPAASPLKPPQSTPTPPAAAPKPLVPSLPESPSDATPDTAAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFTVAKAPAKSPSLAPEPSAKAPKADKENSLSPDSSESSQINSTKDNSGTVKTIVYGKWLSLVLGVILVTVFSS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0710 293 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Vra2g0710 293 Pfam Fasciclin domain 83 217 IPR000782 -
Vra2g0710 293 MobiDBLite consensus disorder prediction 32 65 - -
Vra2g0710 293 SUPERFAMILY FAS1 domain 70 218 IPR036378 -
Vra2g0710 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 292 IPR045003 -
Vra2g0710 293 MobiDBLite consensus disorder prediction 36 59 - -
Vra2g0710 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 292 - -
Vra2g0710 293 SMART fasc_3 113 218 IPR000782 -
Vra2g0710 293 MobiDBLite consensus disorder prediction 229 265 - -
Vra2g0710 293 MobiDBLite consensus disorder prediction 251 265 - -
Vra2g0710 293 Gene3D FAS1 domain 57 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0710 Vra-Chr2 6047910 6049072 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0710 - - gmx:100790242 426.787