Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0705 ATGAAACAAGCAACTATTTTCTCCTTATCACTCTTCCTACTCCTTTGGTCTACCACCTTGGCCATTTCACCAGCACCTGCAGCAGCTCCAAAAGCCCCAGCAGCAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCCCCTGACTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTCATTCGCCTCCTCAAAACCACAGAAATCATCAACAACGTCAACTCACAGCTCATAACAGCTAAGACTGGGGGTATAACCATTCTTGCACCAGATGATTCTGCCTTTTCAAACCTCAAAGCTGGCTTCCTCAATTCCCTCAACGAAGGCCAGAAAATTGAACTTGTCCAGTTCCACATATTGCCAGAGTATGTGTCAAGCTCAAACTTTGATTCTCTAAGCAACCCTGTGCAGACAGTGGCTGGTAAAGACCCTGTAAGGCTTCCACTGAACGTAAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCATTCTTGGAGTAGTATACTCTGATAATAAACTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAACAAGGCTCCAGCTTTGGCTCCAACATCTCTTGCAAAGGCTCCCAAAGCTGCTAAAGAAAACTCTTCTGATGACGATCAAGAAGAAACAAACCAGGATCACAATAAATCTGGGGCACTCAGTTTGAGCAGAACAAAGTTGATGTCACTTGGGATAGCCTTGGTCGCTATGGCAACCATGTGGAGTTGA 843 0.4555 MKQATIFSLSLFLLLWSTTLAISPAPAAAPKAPAAKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIINNVNSQLITAKTGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEYVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPTSLAKAPKAAKENSSDDDQEETNQDHNKSGALSLSRTKLMSLGIALVAMATMWS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0705 280 MobiDBLite consensus disorder prediction 229 256 - -
Vra2g0705 280 Gene3D FAS1 domain 54 212 IPR036378 -
Vra2g0705 280 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Vra2g0705 280 MobiDBLite consensus disorder prediction 236 251 - -
Vra2g0705 280 Pfam Fasciclin domain 78 212 IPR000782 -
Vra2g0705 280 MobiDBLite consensus disorder prediction 43 60 - -
Vra2g0705 280 MobiDBLite consensus disorder prediction 29 67 - -
Vra2g0705 280 PANTHER FASCICLIN DOMAIN PROTEIN 4 280 - -
Vra2g0705 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 280 IPR045003 -
Vra2g0705 280 SMART fasc_3 108 213 IPR000782 -
Vra2g0705 280 SUPERFAMILY FAS1 domain 49 213 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0705 Vra-Chr2 6014906 6016003 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0705 - - gmx:106794109 433.335