Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0700 ATGAAACAAACAACCCTTTTCTCCTTATCACTCTTCTTACTCTTTTGCTCTACCACCTTGGGCATTTCACCAGCACCTGCAGCAGCTCCAAAAGCCCCAGCAGCAAAAACTCCCCATACCCCAAAGGCTGTAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCCCCTGACTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTCATTCGCCTCCTCAAAACCACAGAAATCATTAACAACGTCAACTCACAGCTCATAACAGCCAAGACTGGAGGCATAACCATTCTTGCACCAGATGATTCTGCCTTTTCAAACCTCAAAGCTGGCTTCCTCAACTCCCTCAACGAAGGCCAGAAAATCGAACTTATCCAGTTTCACATATTGCCACAATTTGTCTCAAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACAGTGGCGGGTAAAGACCCTGTAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCATTCTTGGAGTAGTATATTCTGATAACAAACTTGGGATTTATCACGTCGACAAGGTGCTTCTTCCTCTAGATTTCTTTGCAACCAGTAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAATCTGCCAAGGAAAATTCTTCTGAGGATTATCAAGGCGAAACAAAGCAGGATCAGAATAAATCTGGGGCAGTGAGTTTGGTTGGCCTTGGTGGAACAAAGTTTATGTCACTTGGCATAGCTTTGATGGCAGTGGCAACCATGTGGTGTTTATGA 855 0.4561 MKQTTLFSLSLFLLFCSTTLGISPAPAAAPKAPAAKTPHTPKAVAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIINNVNSQLITAKTGGITILAPDDSAFSNLKAGFLNSLNEGQKIELIQFHILPQFVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFATSKAPALAPSSLAKAPKSAKENSSEDYQGETKQDQNKSGAVSLVGLGGTKFMSLGIALMAVATMWCL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0700 284 Pfam Fasciclin domain 78 212 IPR000782 -
Vra2g0700 284 MobiDBLite consensus disorder prediction 27 67 - -
Vra2g0700 284 MobiDBLite consensus disorder prediction 228 251 - -
Vra2g0700 284 SMART fasc_3 108 213 IPR000782 -
Vra2g0700 284 PANTHER FASCICLIN DOMAIN PROTEIN 4 282 - -
Vra2g0700 284 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 282 IPR045003 -
Vra2g0700 284 SUPERFAMILY FAS1 domain 44 213 IPR036378 -
Vra2g0700 284 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Vra2g0700 284 Gene3D FAS1 domain 54 212 IPR036378 -
Vra2g0700 284 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0700 Vra-Chr2 5968240 5969354 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0700 - - gmx:100793759 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0700 2 5968240 5969354 Vra2g0700 2 5968240 5969354 ECH