Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0679 ATGTCGGCACCGCAGAGATTTCTCTGCACTCTCTCCCACTCCTTTCCTCGCTCTTCTTCTCTCTGCACCTTCAAATCTAGAACCTTCCTTTTCCTTCCATTCGTTCGCTCTTACCTCACCCTAACTCCCTTGCTCTCACCAATGCCTCGCAATCAGCGAAGTGGCGCGCACATGGAGAGGCGATGGAAAGAGAAAGCCAAAACTGAGGCGAAGTTGCCGGCTACGGGAAACGTAGCTGCTGTAACTGCTGCGGAAACTGTTACTAATAAGATTGCTGGATTGAGTATTGGTGATAACGGTGGGAAAACCGGTGCGCATGGTTCGATTTGGAAACCTAAGTCTTATGGAACTGCGAGTGGAGGCGCTGTTACTGAAGTGGAAAATGGAGCTGGAGTTGAGGCAAGTGTGGCTTCGACGCACAAGGATGGTGGAAGTAGTTTGAGTAAGATATTTCGAGGTAATCTGTTAGAGAAATTCACTGTGAACAACTCCACGTACACACGTGCACAAATCAGAGCGACTTTCTATCCCAAATTTGAAAATGAAAAGTCGGATCAAGAGGTCCGGACCAGGATGATTGAGTTGGTAGCAAAAGGGTTGGCTACCTTAGAGGTTTCACTTAAACATTCTGGCTCTCTTTTTATGTATGCGGGTCATGAGGGTGGAGCTTATGCAAAAAACAGTTTCGGAAATATATATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTCGTGAGGCATGGGGAACTGAAGCTTCAAAAAAGCAGGCTGAATTTAATAATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTAGTAACTGCTGTTCTTGGAGACCATGGACAGCGTCCCCAAGAAGATTATGCGGTAGTTACGGCAGTTACTGAATTGGGCAATGGAAAGCCAAAGTTCTATTCAACTCCTGAGATAATAGCTTTCTGTCGAAAATGGCGCCTTCCAACAAATCATGTGTGGCTGTTTTCAACAAGAAAATCAGCCACTTCTTTCTTTGCTGCGTATGATGCCTTATGTGAGGAGGGTACTGCAACGTCTGTATGCAAGGCTCTTGATGAAATTGCTGACATCTCAGTACCAGGTTCAAAAGACCATGTTAAGGCCCAAGGTGAAATTTTAGAAGGTCTTGTGGCTCGTCTTGTAAGTCATGATAGTTCAAACCAGATAGAGAAAACTTTGAAAGAATTTCCACCTCCACCTGCCGATGGAGTGGCCCTTGATTTTGGACCAAGTCTAAGGGAAATATGTGCAGAAAATAGAGATAATGAAAAACAGCAAATAAAAGCACTTCTCGAGAGTGTTGGTAGTTCTTTTTGTCCAAGCCAGTTGGATTGGTTTGGGACTCATGGTGCAGATTATCATTCAAGAAATGTGGACAGATCTGTTCTTTCAAAATTTTTACAAGCCCATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAGTTGTTCGGTTAATGAGAGAGAAACGCTACCCTGCTGCCTTCAAATGTTATCATAACTTCCACAAGGTTGATGGCATGTCAAGTGACAATGTTTTCTACAAAATGGTCATTCATGTACACAGTGATTCTGGTTTTCGACGATACCAGAAAGATATGAGGCTTAAGCCAGGATTATGGCCATTATATCGAGGTTTTTTTGTTGATGTAAATTTATTTAACGCAAACAAGGAGACAGCTGCTGAAATTTCTAGTAACAGTGTAAACGAAACTGGTAGCAACACTGCTGGGGAAGATGACTTTGCGGACGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGCTTCGAACGTTTCTTATTCGAAATGGCCTGTCAATTCTGTTCAAAGAAGGTCCAGCTGCTTACAAGTCTTATTATCTCAGACAAATGAAAATTTGGGGAACCTCTCCAGCAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTATATATACGAAGGAAGTGTGGAAATAAGCAACTGTCATCATCAACATATCTGAGTGAAGCGGAACCTTTTCTTGAACAGTTTGCAAAACGTAGTCCACAGAACCAAGTTCTGGTAGGTTCTGCGGGTAATTTAGTTAGAACTGAAGATTTCTTGGCTATCGTTGAGGGAGGCGTGGATGAAGAAGGTGATCTTCTGGCAGAGCGTGAGATAACACTTCCAGGGCCTAATATCTCAGTCAAAGATACAGTTCCAAAATATGAAGGGTTGATTGTATTCTTTCCTGGAATACCTGGTTGTGCCAAGTCCTCCCTTTGCAAAGAATTGCTAAATGCCGAAGGAGGACTAGGAGATGCTCGACCACTTCATAGTCTCATGGGTGACCTGATTAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAGCGCAGAAAGAAACCAAATTCGATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAAACTGATAGAAGACATGTGTCACAAAACCAGGGCATCTGCTGTACCAGTTGTAGCTGAATCTGAAGGAACCGATTCAAATCCTTTTTCTCTTGATGCATTAGCTATTTTCATGTTTCGCGTGCTTCAACGAGTCAATCATCCGGGAAATCTTGACAAAGCATCTCCAAATGCTGGCTATGTGCTGCTAATGTTTTATCATCTCTATGAGGGCAGGAGCCGTAAAGAGTTTGAGGGTGAATTAATTGAGCGTTTCGGATCACTTGTCAAGATGCCACTCCTGAAATCTGATAGGGATCCCCTTCCTAACCCAGTGCAGTCCATTTTGGAGGAAGGAATTGATTTATATAAACTTCACACTATAAGACATGGAAGATTAGAGTCTACCAAAGGATCCTACGCAAAAGAATGGTTAAAATGGGAGAAACAGTTACGGGATATACTTTGTGGAAATGCCGAGTATTTTAATTCTATTCAGGTCCCATTTGAATTTACTGTCAAGCAAGTGTTGGAACAGTTGAGAAGCATTGCAAAGGGAGATTACACACCACCAGATACTGAAATAAGGAAATTTGGTACCATTGTTTTTGCTGCTCTCACCACGCCAGTTACTGAAATTAAAGACGCCCTCAATAAATTGGCCGAGAGTAATCCCAAGATTGACGCATTCCTTAAAGACAAACATCTCGAGAACCTTAATCGAGCTCATGTGACTCTTGCCCACAAGAGAAGCCACGGCATCAAAGCTGTAGCTGATTATGGTATCTATCTTAATAAAAAGGTTCCAGTGGAGTTGGCAGCACTGCTCTTCTCAGATAAAATGGCCGCGTTGGAAGCTTGTCCTGGCTCAGTGGAAGGTGAGAAGATAGTCTCAAAAAATCCGTGGCCTCATATAACTTTATGGACTGCTCAAGGTGTTGCACCCAAGGAGGCCAACATGTTACCGCAGTTGTTTGCAGCGGGGAAAGCAACCCGAATTGACTTCAATCCTCCCATCATTTTATCTGGCACAATTGACTTTTATTGA 3480 0.4261 MSAPQRFLCTLSHSFPRSSSLCTFKSRTFLFLPFVRSYLTLTPLLSPMPRNQRSGAHMERRWKEKAKTEAKLPATGNVAAVTAAETVTNKIAGLSIGDNGGKTGAHGSIWKPKSYGTASGGAVTEVENGAGVEASVASTHKDGGSSLSKIFRGNLLEKFTVNNSTYTRAQIRATFYPKFENEKSDQEVRTRMIELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISMELVTAVLGDHGQRPQEDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSATSFFAAYDALCEEGTATSVCKALDEIADISVPGSKDHVKAQGEILEGLVARLVSHDSSNQIEKTLKEFPPPPADGVALDFGPSLREICAENRDNEKQQIKALLESVGSSFCPSQLDWFGTHGADYHSRNVDRSVLSKFLQAHPADYSTKKLQEVVRLMREKRYPAAFKCYHNFHKVDGMSSDNVFYKMVIHVHSDSGFRRYQKDMRLKPGLWPLYRGFFVDVNLFNANKETAAEISSNSVNETGSNTAGEDDFADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPAAYKSYYLRQMKIWGTSPAKQRELSKMLDEWAVYIRRKCGNKQLSSSTYLSEAEPFLEQFAKRSPQNQVLVGSAGNLVRTEDFLAIVEGGVDEEGDLLAEREITLPGPNISVKDTVPKYEGLIVFFPGIPGCAKSSLCKELLNAEGGLGDARPLHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNAPNEEVWKLIEDMCHKTRASAVPVVAESEGTDSNPFSLDALAIFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYEGRSRKEFEGELIERFGSLVKMPLLKSDRDPLPNPVQSILEEGIDLYKLHTIRHGRLESTKGSYAKEWLKWEKQLRDILCGNAEYFNSIQVPFEFTVKQVLEQLRSIAKGDYTPPDTEIRKFGTIVFAALTTPVTEIKDALNKLAESNPKIDAFLKDKHLENLNRAHVTLAHKRSHGIKAVADYGIYLNKKVPVELAALLFSDKMAALEACPGSVEGEKIVSKNPWPHITLWTAQGVAPKEANMLPQLFAAGKATRIDFNPPIILSGTIDFY* 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0679 1159 PANTHER TRNA LIGASE 1 106 1143 IPR038837 GO:0003972|GO:0006388
Vra2g0679 1159 PANTHER TRNA LIGASE 1 106 1143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0679 - - gmx:100815563 2097.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0679 2 5739422 5759864 Vra2g0679 2 5739422 5759864 ECH