Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0678 ATGGAGTGGGTGAAAATGAAGGAGTGCGCGAGGGAGTTCATGGTTGGGGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAGCAGAGTTTGGTCAATGAAGATTCATTTATTGTCAAAAACTTAGGGAGAGATTCCTACATTGGAAAAAGACTCAGAGGACCCTGTGCCAAGCTTTTCGACAAATTGAGCTTCTTCAACGAGTATTTGCCCGAGGATAAGGATCCTCTTCACGCTTGGTCCGTCATTTTCTTCGTTTTCCTTCTCGCCTTCTTAGCTTTGTATGTGAATTTTGAGCGTGATCCGGACGCGCCGCCGGTGAAGCAGGTGTTTCTGCATCCTCCCAGTGCTTCTCGTGTTGTGCTTCCTGACGGACGGTACATGGCGTATAAGGAGCAAGGTGTTTCGTCTCACAGAGCTAGGTTTTCCATCATTGCTCCTCATAGCTTTCTTTCCTCCCGGCTTGCAGGGATTCCGGGAGTTAAAGATTCTCTGCTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCATCCCAAGCGGAACCTGGAATCCTCGGCAACAGATATGGCATTTTTGGCGGATGCTCTCGGTGTGAACAAGTTTTGGGTTGTTGGTTATTCAAGCGGGAGTATGCATGCTTGGGCTGCACTTAGATACATTCCTGATAGGCTTGCTGGTGCGGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTATGATGACGAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGGAGAAGAAAATTCTTGTACTTCTTAGCCCGGAGGTTTCCTAGATTTCTAGCCTTCTTCTATCAGCGAAGCTTCTTGTCTGGAAAGCATGGACAGATTGATAAGTGGCTGTCATTGTCTCTGGGAAATAGGGATAAAGCACTGATGGAAGATCCAATTTATGAGGAATTCTGGCAAAGGGATGTGGAGGAATCAACCAGACAAAGAGATGTGAAACCTTTTGTGGAGGAAGCTGCTTTGCAGGTTACAAATTGGGGTTTCAGCCTTTCAGACCTCAAGTTGCAGAAGAGGAAACCGACTAGTGAGTTACTCAGTTGGCTGAAATCAATGTTCACTGAAACTGAGGAATATACAGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCCCCGTCAATGACTGATTTTGTGCACCGCGTGCTACCCGGAGCCGCTGTACATAAACTCCCATATGAAGGCCATTTCACTTATATATACTTTTGTCATGAATGCCACCGGCAGATATTTACTACACTTTTCGGAACCCCACAAGGTCCACTCAGCATTCCTGTAAATGTAAATGAAGCCACCCTAGAAGCCAATATTGAACAGCAGGCAGGAGTAAACGATGATGAGTATGCTACAGACTAG 1455 0.4619 MEWVKMKECAREFMVGVAEMTVEFGKGCRDIVKQSLVNEDSFIVKNLGRDSYIGKRLRGPCAKLFDKLSFFNEYLPEDKDPLHAWSVIFFVFLLAFLALYVNFERDPDAPPVKQVFLHPPSASRVVLPDGRYMAYKEQGVSSHRARFSIIAPHSFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPKRNLESSATDMAFLADALGVNKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPMMTKEERRRTWNKWTRRRKFLYFLARRFPRFLAFFYQRSFLSGKHGQIDKWLSLSLGNRDKALMEDPIYEEFWQRDVEESTRQRDVKPFVEEAALQVTNWGFSLSDLKLQKRKPTSELLSWLKSMFTETEEYTGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTLFGTPQGPLSIPVNVNEATLEANIEQQAGVNDDEYATD* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0678 484 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 471 - -
Vra2g0678 484 Gene3D alpha/beta hydrolase 106 437 IPR029058 -
Vra2g0678 484 PANTHER ALPHA/BETA FOLD HYDROLASE 9 471 - -
Vra2g0678 484 SUPERFAMILY alpha/beta-Hydrolases 117 443 IPR029058 -
Vra2g0678 484 Pfam alpha/beta hydrolase fold 165 433 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0678 Vra-Chr2 5733412 5737646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0678 174 254 Acyl Lipid Metabolism Gene Families AT4G02340 32.143 7.68e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0678 - - gmx:100790561 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0678 2 5733412 5737646 Vra2g0678 2 5733412 5737646 ECH