Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0671 ATGGCAGCGTCACGAATCGTAGCCCATCCACCACCCTATCTCCACCGCCAGTGTTCGCCGTCAGACGCCGTGTCGTTCCCCAACCCCACGCTTCACCCAAAACGGTACCGTAACCTCAGCATTCGTTCTTCTCTTCACGAGGGGAAGCAGAAGAAGAACGATCTCGCTAATAAACCTCACTCAGTCGAATTGCGAACCAGCCCCAACGACGTCGTTTCCCGCGATCCGCTCGTTCTTCCGCGGCCTTTATCTGCTTCAGTTTCTGACGGTTCTGGCCTTCGTGTGGCATATCAGGGGGTTCATGGTGCGTACAGTGAATCAGCAGCACATAAGGCCTACCCAAATTGTGAAGCTGTGCCGTGTGAACAATTTGAAACCACTTTTGATGCTGTTGAAAGGTGGATTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGTATCCATAGAAATTATGACCTTTTACTCCGCCATAGTTTACACATAGTAGGAGAAGTAAAATATGCTGTCCGTCACTGTTTGATGGCCAACCATGGTGTTAAACTTGAGGATTTGAACCGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGTGAGAACACACTGACAAAATTGGGATTGGTGCGAGAAGCAGTTGATGATACAGCTGGTGCCGCTAAGCAAGTTGCCTTGCTCGGACTACAAGATGCAGGAGCAGTTGCTAGTTCTTCTGCTGCAAAGATCTATGGGTTGAATATACTTGCTGAAGACATTCAGGATGATAGTGATAATGTCACTCGATTTTTAATGTTAGCCCGAGAACCTATAATTCCAGGCATTGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAAGGTCCCGGGGTTCTTTTCAAGGCCCTTGCTGTTTTTGCATTGCGTCAGGTTAACCTCACAAAGATTGAAAGCCGACCTCTGCGAAACCAACCTCTACGAGCATCAGATGATAGCAGCAATTCCAAGTACTTTGATTATCTTTTTTATGTTGATTTTGAAGAATCAATGGCTAATCAGAATGCACAAAATGCCCTAAGACATCTAAAGGAATTTGCTACATTCTTGCGAGTGCTAGGGAGTTATCCAGTGGACACTAGCTCGACGTGA 1137 0.4609 MAASRIVAHPPPYLHRQCSPSDAVSFPNPTLHPKRYRNLSIRSSLHEGKQKKNDLANKPHSVELRTSPNDVVSRDPLVLPRPLSASVSDGSGLRVAYQGVHGAYSESAAHKAYPNCEAVPCEQFETTFDAVERWIVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKYAVRHCLMANHGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQVALLGLQDAGAVASSSAAKIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGIDRPFKTSIVFSLEEGPGVLFKALAVFALRQVNLTKIESRPLRNQPLRASDDSSNSKYFDYLFYVDFEESMANQNAQNALRHLKEFATFLRVLGSYPVDTSST* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0671 378 CDD PBP2_Ct-PDT_like 94 271 - -
Vra2g0671 378 ProSitePatterns Prephenate dehydratase signature 2. 309 316 IPR018528 GO:0004664|GO:0009094
Vra2g0671 378 MobiDBLite consensus disorder prediction 45 59 - -
Vra2g0671 378 ProSiteProfiles ACT domain profile. 283 372 IPR002912 -
Vra2g0671 378 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 376 - -
Vra2g0671 378 ProSiteProfiles Prephenate dehydratase domain profile. 94 269 IPR001086 GO:0004664|GO:0009094
Vra2g0671 378 CDD ACT_CM-PDT 281 372 - -
Vra2g0671 378 ProSitePatterns Prephenate dehydratase signature 1. 245 267 IPR018528 GO:0004664|GO:0009094
Vra2g0671 378 SUPERFAMILY ACT-like 264 373 IPR045865 -
Vra2g0671 378 SUPERFAMILY Periplasmic binding protein-like II 94 274 - -
Vra2g0671 378 Gene3D - 89 177 - -
Vra2g0671 378 MobiDBLite consensus disorder prediction 45 75 - -
Vra2g0671 378 Gene3D - 178 257 - -
Vra2g0671 378 Pfam Prephenate dehydratase 95 271 IPR001086 GO:0004664|GO:0009094
Vra2g0671 378 Gene3D - 277 375 - -
Vra2g0671 378 PANTHER AROGENATE DEHYDRATASE 31 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0671 Vra-Chr2 5615439 5620776 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0671 K05359 - gmx:100787387 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0671 2 5615439 5620776 Vra2g0671 2 5615439 5620776 ECH