Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0651 ATGGACGACGAACTGCTCGAGCTGCAGCGACAATTCGAGTTCGCGCAGCAAGCCAAGTCGAGCATTCGATTATCAGAGCGAAACGTCGTCGAATTGGTCCAAAAACTGCAGCAACTTCAAATCATTGATTTCGAACTTCTCCACACTGTCTCCGGCAAAGAGTACATCACTCTCGATCAACTGAGGAATGATATGGTGGCTGAGGTGAAGAGATTAGGGCGCGTTTCTTTGATCGATCTCGCTGACTCTACTGGAGTTGACTTGTACTACGTGGAGAAGCAGGCGCAGAGCGTTGTGACAGCACACCAAGAACTCATGTTGACTCAGGGAGAAATCATGTCTAGCTCTTATTGGGACTCAGTCGCGGAAGAGATTAACGAGAGGCTTCAGGAGTGTAGTCAGATTGCGCTGACGGAGATCGCGGCGCAATTGAATGTCGGTTTGGACTTGGTTGCCTCCGTGTTGGACCCGCGCCTTGGAAGAATTGTGAAAGGAAGGCTTGAAGGTGGCCAGCTGTATACTCCTGCCTATGTGGCTCGTGTTGGTGCCATGGTTCGAGGCGCTGTGCGGGGCACCACTGTTCCAACCAATTTGACTGTGGTATGGAGTTCGTTGCAGCAGTTGCTGCAAGAAATTGACGGAACCAGCGGTTTGGCTGTTGAAGGATCTTTCTTCCAGTCATTGTTTAACGGACTGGTGAAGGAAGGGGAGGTTCTAGGGTCACTTCGTGCAGGAGTACATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAGTTTGTGGAGTCATTTTTTTCTCAGAATTCTTTTATCACCTATGAGGCGCTGCACAAACTTGGAATTCCGCAGCCCATTCAATTTTTGCAGTCCAGATACCCTGAAGGCAAACCTTTGGTTACAACATTTGTTCATCAATCTATGATTGAGATGCTAGATGCTGCTACGGAGGATGCTATTGACCGTGGTAGCTGGAGTGATTCTCTTTCCTTGTTACCTTCATCTTTTACACCTCAAGATGCTTCTAAAATGTTGTCCTTTTGTCAATCTGTGCAAAATGCTCTTAAGTCTAACAAAGCACATATTTTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATAAAGGACATCTGTGATCATGTTGTGAAAGAGTTGGAGACGTTAGATGTTTCAAGGTCTGCTGGCACTACCATGCCTGGAAATGTGAAAGTACCCAATGAAGCAAAAGTAGGACGGGAATCGAGCAGGTTGAACGAGTCCATTGAGATGGCAAGTGATGGTGGTGCCAACAGGCAAGCTGATAAAGGATCAAAGAAGAAAAAGGGGAAAGCCACAGGGAATGCAGTAGTAAATCTATCTGAAAGTGGTGCAGATAACCAGGAACAGACTTCGACAAAATCTAAGAGAGGCCAGAAAAGAGGTAAGGACACATCTGCACAAACATCTGATTCGAAGACAGGTTCTAGGAAAGAGTTGCTTAAAATAAAAGAGGAAGATCTCAGTCCCTCAGAAGAATGGATCATGCAGAAAATTACAGTATTGGTTTCTGATTTTGAAGAACAAGGTATAGATGATCCTGAAATAATTCTTAGGCCCTTGGCTAACCAATTAAGGCCTACAATAATCAATTCTTGGGTGGAGAAAAAGAAGGCCCTGCTTACAAACAATGCAGAAAGAATGAAACGTTTGCTTGATAATTTGCAGAAGAAACTTGACGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTGGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGAACAGTAGCAGCTCCTATGGTGGATTTGCTTCTTCATAACCTGGATGAGCACAACAAATTAAAGAATGGACTTGACGTGCAGGAAGCTCCAAATTCTGAGTTTGTTTCACTTAGTCCTGCTGACAGAACTGCAATTTCTAAGAGTTTTCCAGGAGCTCTTGCAAACAAGGCTCTTGCTGTTGTTGAATCATTGGAAGGAAAGAGTGTGGAGACATTCATGGCTGCTTTTAGAATGGTTACAGAAGAGAGTGGGCTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTCTTACATTCATATCGTAAGGAATTGACATCTCAAGTTTCTGCTGAGACTGACCCTGTATCACTTCTAGCAAAAGTTGTTTCTTTACTTTATATCCAGGTTTACCACAAAGCTCTTCATGCTCCTGGAAGGGCCATTTCCGTTGCCATTTCTCATTTAAGGGATAAGGTAGATGAGTCGGCATGCAAGATTTTAACTGATTATCAGACTGCAACAGTCACTCTTTTGACACTTGTAGCAGCTTCACCCGGTGAGGATAAGGATTGTGCATCTGATAGGATTTTGAGTACAAGGGAACTTCTAGAGAGCCAAATGCAGGACCTCAAAAACTTGGTTTTGGGCACGACCCAATCTTCATAA 2460 0.4382 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQQLQIIDFELLHTVSGKEYITLDQLRNDMVAEVKRLGRVSLIDLADSTGVDLYYVEKQAQSVVTAHQELMLTQGEIMSSSYWDSVAEEINERLQECSQIALTEIAAQLNVGLDLVASVLDPRLGRIVKGRLEGGQLYTPAYVARVGAMVRGAVRGTTVPTNLTVVWSSLQQLLQEIDGTSGLAVEGSFFQSLFNGLVKEGEVLGSLRAGVHWTPAVFAVAQKEFVESFFSQNSFITYEALHKLGIPQPIQFLQSRYPEGKPLVTTFVHQSMIEMLDAATEDAIDRGSWSDSLSLLPSSFTPQDASKMLSFCQSVQNALKSNKAHIFGDFYVLSSSFIKDICDHVVKELETLDVSRSAGTTMPGNVKVPNEAKVGRESSRLNESIEMASDGGANRQADKGSKKKKGKATGNAVVNLSESGADNQEQTSTKSKRGQKRGKDTSAQTSDSKTGSRKELLKIKEEDLSPSEEWIMQKITVLVSDFEEQGIDDPEIILRPLANQLRPTIINSWVEKKKALLTNNAERMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDLLLHNLDEHNKLKNGLDVQEAPNSEFVSLSPADRTAISKSFPGALANKALAVVESLEGKSVETFMAAFRMVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLAKVVSLLYIQVYHKALHAPGRAISVAISHLRDKVDESACKILTDYQTATVTLLTLVAASPGEDKDCASDRILSTRELLESQMQDLKNLVLGTTQSS* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0651 819 MobiDBLite consensus disorder prediction 447 463 - -
Vra2g0651 819 MobiDBLite consensus disorder prediction 464 478 - -
Vra2g0651 819 Coils Coil 549 583 - -
Vra2g0651 819 MobiDBLite consensus disorder prediction 392 494 - -
Vra2g0651 819 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 817 IPR018611 GO:0061666|GO:0071569
Vra2g0651 819 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0651 1 785 EF-hand Containing Proteins AT3G46220 61.929 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0651 K22755 - gmx:100808087 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0651 2 5259120 5267613 Vra2g0651 2 5259120 5267613 ECH