Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0643 ATGAAAGGAATTGATTTGCTATGTTCTTCCTCAGCTTCCACAGCTGTAACTTCTAGCATGCACCATCGTTCTACGGTGCGTGGAAGAACAAAAAGCTACGACCATGATGGAAGGAAAAGCCAACTCTGTGTACCTTGTTCATCCCAATTGCCCTTAACTCCTAAGCCTCACTTGGAGAAGCACAGAAAGAGCTCGGCTGATAAGGCTAACAGTGACACGCGTAGAAAAAGTTCTGTTGATGTTAATGACCTATATACTCATGCCAGTGCTGAGCGTTCATCCAGAAGATATCTCCTTGCTGACGCGCCATTCGTTGAGTGGGTATCAGAGTCTAATAAATTCACACAAATGGTTCCTTCTCGACATGATGTCGAAGACAAGACCATGGTTATAAAAAGAAACCATGCTCCTACTCTTCGCTCCTCTTCTTCAGCTCGCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAGGCCTGCGAAGGGAAAATTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGAAATGGAGACAAAGAAAGTGACGATAATCGGAGACGTGACACCAATGGGGGTACTGGCGAGTGTATCCAAGGTGAAGAATGCACAACTTTGGCCATCTCTCTAG 651 0.4485 MKGIDLLCSSSASTAVTSSMHHRSTVRGRTKSYDHDGRKSQLCVPCSSQLPLTPKPHLEKHRKSSADKANSDTRRKSSVDVNDLYTHASAERSSRRYLLADAPFVEWVSESNKFTQMVPSRHDVEDKTMVIKRNHAPTLRSSSSARSKDQVVVLRVSLHCKACEGKIRKHISKMEGVTSFSIEMETKKVTIIGDVTPMGVLASVSKVKNAQLWPSL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0643 216 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 215 - -
Vra2g0643 216 MobiDBLite consensus disorder prediction 55 78 - -
Vra2g0643 216 MobiDBLite consensus disorder prediction 17 78 - -
Vra2g0643 216 PANTHER OS08G0405700 PROTEIN 1 215 IPR044526 -
Vra2g0643 216 SUPERFAMILY HMA, heavy metal-associated domain 150 207 IPR036163 GO:0046872
Vra2g0643 216 CDD HMA 153 206 IPR006121 GO:0046872
Vra2g0643 216 Pfam Heavy-metal-associated domain 154 199 IPR006121 GO:0046872
Vra2g0643 216 ProSiteProfiles Heavy-metal-associated domain profile. 150 210 IPR006121 GO:0046872
Vra2g0643 216 Gene3D - 147 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0643 Vra-Chr2 5137368 5139567 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0643 - - gmx:100807544 340.502