Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0642 ATGTCCACAAAAACCATGAAAATTATGAAAGGAATTGATTTGCTATGTTCTTCCTCAGCTTCCACAGCTGTAACTTCTAGCATGCACCATCGTTCTACGGTGCGTGGAAGAACAAAAAGCTACGACCATGATGGAAGGAAAAGCCAACTCTGTGTACCTTGTTCATCCCAATTGCCCTTAACTCCTAAGCCTCACTTGGAGAAGCACAGAAAGAGCTCGGCTGATAAGGCTAACAGTGACACGCGTAGAAAAAGTTCTGTTGATGTTAATGACCTATATACTCATGCCAGTGCTGAGCGTTCATCCAGAAGATATCTCCTTGCTGACGCGCCATTCGTTGAGTGGGTATCAGAGTCTAATAAATTCACACAAATGGTTCCTTCTCGACATGATGTCGAAGACAAGACCATGGTTATAAAAAGAAACCATGCTCCTACTCTTCGCTCCTCTTCTTCAGCTCGCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAGGCCTGCGAAGGGAAAATTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTCAGCATAGAAATGGAGACAAAGAAAGTGACGATAATCGGAGACGTGACACCAATGGGGGTACTGGCGAGTGTATCCAAGGTGAAGAATGCACAACTTTGGCCATCTCTCTAG 675 0.443 MSTKTMKIMKGIDLLCSSSASTAVTSSMHHRSTVRGRTKSYDHDGRKSQLCVPCSSQLPLTPKPHLEKHRKSSADKANSDTRRKSSVDVNDLYTHASAERSSRRYLLADAPFVEWVSESNKFTQMVPSRHDVEDKTMVIKRNHAPTLRSSSSARSKDQVVVLRVSLHCKACEGKIRKHISKMEGVTSFSIEMETKKVTIIGDVTPMGVLASVSKVKNAQLWPSL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0642 224 Gene3D - 155 219 - -
Vra2g0642 224 MobiDBLite consensus disorder prediction 63 86 - -
Vra2g0642 224 SUPERFAMILY HMA, heavy metal-associated domain 158 215 IPR036163 GO:0046872
Vra2g0642 224 MobiDBLite consensus disorder prediction 25 86 - -
Vra2g0642 224 PANTHER OS08G0405700 PROTEIN 9 223 IPR044526 -
Vra2g0642 224 CDD HMA 161 214 IPR006121 GO:0046872
Vra2g0642 224 ProSiteProfiles Heavy-metal-associated domain profile. 158 218 IPR006121 GO:0046872
Vra2g0642 224 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 9 223 - -
Vra2g0642 224 Pfam Heavy-metal-associated domain 162 207 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0642 Vra-Chr2 5117504 5120030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0642 - - gmx:100807544 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0642 2 5117504 5120030 Vra2g0642 2 5117504 5120030 ECH