Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0636 ATGGCGGAAACAAACCCTGCTTCTGTTTCTTCTTCCTCGGGTGATTCGAATTGGAGAGACAACAAGTTGGTGAAAGGATCATTTGCGGTCTCCGGAATCATGCTCACCCTCGTTACCTATGGCATCTTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGTGAACAAGGACTACTTCAAATATTCTCTTTTTCTCGTTTTCTGCAACCGCATCACGACGTCTGCTGTTTCGGCTGGGGCTCTAGTGGCACGGAACAAAGTTTTGGAACCTGTTGCCCCCATTTATAAGTACTGCCTTGTGTCAGTATCGAACATTCTTACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACAGTCATAATGCAGAAGAAATATCGAGGAACTGACTATTTGCTGGCCTTTATAGTAACCCTTGGCTGCTCAGTGTTCATTCTCTATCCTGCAGGGACCGACATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGAGTTTTGCTAATGCTTGGTTATCTTGGGTGTGATGGTTTTACAAGCACTTTCCAAGATAAGATGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGCTCTTGTGTTCTTAGCCTGACAGGCCTTATCATACAAGGACAACTATTACCAGCAGTAGAATTTGTATATCTCCATAAGGATTGTTTCTTTGACATTGCATTGCTTTCAACAGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTCGCTACAATAATGACAACTAGACAGTTGGTAAGCATCATTCTATCATGTGTGTGGTTTTCCCATCCTCTTAGCTGGGAACAATGGATTGGAGCTGTAATTGTCTTTGGTGCAATTTATTCAAAAAGCTTCTTGAGGAAAGCACCCGAAAAGACAACAACCTCATCTGTAGAACATGTACAAAATGGAAATTCAAATAATTTGAAGGAGAACCCATGCTAG 1068 0.4139 MAETNPASVSSSSGDSNWRDNKLVKGSFAVSGIMLTLVTYGILQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALVARNKVLEPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTVIMQKKYRGTDYLLAFIVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSCVLSLTGLIIQGQLLPAVEFVYLHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIILSCVWFSHPLSWEQWIGAVIVFGAIYSKSFLRKAPEKTTTSSVEHVQNGNSNNLKENPC* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0636 355 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 16 334 - -
Vra2g0636 355 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
Vra2g0636 355 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 16 334 IPR013657 GO:0055085
Vra2g0636 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0636 Vra-Chr2 5008822 5014034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0636 19 335 Organic Solute Cotransporters AT5G59740 81.388 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0636 K15276 - gmx:100782423 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0636 2 5008822 5014034 Vra2g0636 2 5008822 5014034 ECH
Vra4g0265 4 5290219 5298026 Vra2g0636 2 5008822 5014034 PCT