Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0627 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGGATAACGACGGAGCTTCAAGTTCCCAAGAAATGGACTGACAGAGAAACCAGTCCAGAGAGAACCAAAGTTTGGGCCGAGCCCAAGCCCAAAACGGCCAGAAAAGTCTCCGTCGTCTACTACCTCTCCCGAAACGGTCAACTGGAACACCCTCATTTCATGGAGGTTCCTCTCTCTTCACCTCAAGGACTTTACCTCAAAGACGTCATCAACCGCTTGAACGTTCTCCGAGGGAAAGCCATGTCCAGCATGTATTCTTGGTCCTCCAAACGGAGCTACAAAAACGGCTTCGTTTGGCATGATTTGTCGGAGAACGATTTCATCTACCCGACGCAGGGGCAGGACTACATTCTCAAAGGATCAGAGATTGTTGAGCATAGTGCCGCTGCCGTTGCGAGGGTTAACAAATCGGAAGAGGAGTCCGGTTCGCCTGTAGTGATCACGAGGCGGCGGAACCAGTCGTGGAGTTCTATCGATTTGAACGAGTACCGTGTTTATAAATCCGAATCGTTCGGTGACTCGGCTGGGAGAATCGGTGCTGACGCGGCCACTCAGACGGAGGAGAAGCGGAGGCGGAGGAGGGCGGCGAGGGAGGAAGAGGCGGAAGAGATTCATGAGAAGAATGATGGAATTGACGCGGGAATGGAAGGGGAGAGGGTTTCGCACGTGACTTGTGATAATAACAATAATCATACTACGGAGCTGAGCAGGGATGAGATCTCGCCTCCGCCGTCGGATTCGAGCCCTGAGACGCTGGAGACGCTGGAGACCCTGATGAAGGCAGATGGGCGGCTCGGATTGCGGTCTTCGGAATCGGAGAAGGAGAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCGTCGTCGGTTTTGTTGCAGTTGCTATCGTGTGGCGCTGTGTCTTTTAAAGAGTGTGGGGTTAACGAAGTGAAAGATCAAGGGTTCTCGTTGGTTGGGCACTACAAGTCCAGGATGCCCCGTGGAGCAGGGAATCATGTGGGAAAGGAGACAGGGATATCGATGGAAATTCCGGATTTGAACAGGCTTAGGTTGGAAGATAAGGAATATTTTAGCGGAAGCTTGATCGAAACCAAGAAAGTGGAAACCCCTACTTTGAAAAGGTCTTCTTCTTACAATGCAGATAGCGGTTCCCGGTTAGAGATAGTGGAGCAGGAAGGAGAAGTGGTGCGGGCAAAGTGCATACCAAGGAAATCTAAGACACTACCAACAAAGAAAGAAGAGGGTGGTGGCCAACACGGGAGCAAAAGATTTGACTCACAACAATAA 1320 0.5144 MSVSSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKPKTARKVSVVYYLSRNGQLEHPHFMEVPLSSPQGLYLKDVINRLNVLRGKAMSSMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVEHSAAAVARVNKSEEESGSPVVITRRRNQSWSSIDLNEYRVYKSESFGDSAGRIGADAATQTEEKRRRRRAAREEEAEEIHEKNDGIDAGMEGERVSHVTCDNNNNHTTELSRDEISPPPSDSSPETLETLETLMKADGRLGLRSSESEKENLTVESCPSGRMRASSVLLQLLSCGAVSFKECGVNEVKDQGFSLVGHYKSRMPRGAGNHVGKETGISMEIPDLNRLRLEDKEYFSGSLIETKKVETPTLKRSSSYNADSGSRLEIVEQEGEVVRAKCIPRKSKTLPTKKEEGGGQHGSKRFDSQQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0627 439 Pfam Protein SOSEKI, plant 45 393 IPR010369 -
Vra2g0627 439 MobiDBLite consensus disorder prediction 233 259 - -
Vra2g0627 439 PANTHER OS01G0839200 PROTEIN 11 416 - -
Vra2g0627 439 MobiDBLite consensus disorder prediction 192 217 - -
Vra2g0627 439 PIRSF UCP031043 12 436 IPR021182 -
Vra2g0627 439 MobiDBLite consensus disorder prediction 183 217 - -
Vra2g0627 439 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 416 IPR010369 -
Vra2g0627 439 MobiDBLite consensus disorder prediction 411 439 - -
Vra2g0627 439 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0627 Vra-Chr2 4943730 4948112 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0627 - - gmx:100779732 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0627 2 4943730 4948112 Vra2g0627 2 4943730 4948112 ECH