Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0597 ATGGCCGGCACCAGCCTCTCTCAAGTAATTCAATCGACGCTCCTGGAACTGCCCAGAACCACCGCCCACGTCAGAATCTCCGCCAAAAGCCACCGCGTCTCCGCCACCTCCGGCCATCGCCCCGAGGGACCCCACTGTATCTACGTTGGGCCCCTCGAAACCGCCGACAAAGAGAACCTGGAAGCTCTCTATTGCCAAGCACGGGATGCGTATAATAGTGGTCACCCTCTCATAATTGATGACATGTTTGATAAAGTAGAGTTAAGGTTAAGAAGCTATGGTTCAAAGTCTGTTGTCAAGTATCCTAGGTGCAGTATCAGGAGGCAATCCACATTTGCTGATGCTGAGGAAGATCTTTCTATGGTTTTTGCTTTAGCAAGCACATGGGCCATGTTCCTTGCATTTGGCAGTTTAGCCTGTGTTGGGCCCGTATCATACACTGTTGGCATGGCTTATCAAAGTGCATTCGCTTCAGGCGTATCACTTGGTAGCCAAACACCTGGATTAGGCTTTCTGGCCTTGGTGAACAGCTTTATTTTCGTTGGGCTGGGTGTTATCATCGGCTACCCTGTTGCTTCAGCTTCAGTTAAGGTACTTCAAGGCCTGTGGAGGAATGATTTGGTGGCACTAAAAGGTGCGTGTCCAAATTGTGGCGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAATATTGAGTCACCTCATAGAGCAGATTGTCATGTTTGTGAATGCGTATTAGAATTTCGCACAAAAGTGGAGGTGATATCAAGGATTTCATGCAAACAGGGGATGTGCTCAGTTTAG 804 0.4826 MAGTSLSQVIQSTLLELPRTTAHVRISAKSHRVSATSGHRPEGPHCIYVGPLETADKENLEALYCQARDAYNSGHPLIIDDMFDKVELRLRSYGSKSVVKYPRCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPVSYTVGMAYQSAFASGVSLGSQTPGLGFLALVNSFIFVGLGVIIGYPVASASVKVLQGLWRNDLVALKGACPNCGEEVFAFVRMDRNIESPHRADCHVCECVLEFRTKVEVISRISCKQGMCSV* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0597 267 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 21 254 IPR039987 GO:0009535|GO:0009773|GO:0016730
Vra2g0597 267 PANTHER PGR5-LIKE A PROTEIN 21 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0597 Vra-Chr2 4702352 4705545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0597 - - gmx:100810752 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0597 2 4702352 4705545 Vra2g0597 2 4702352 4705545 ECH
Vra4g0228 4 4982628 4985168 Vra2g0597 2 4702352 4705545 PCT