Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0575 ATGTCGGGAGGTTTCTTTCGAGGCACATCTGCGGACCAGGACACTAGGTTTTCGAACAAGCAAGCGAAGCTAATGAAATCACAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGGTCACCAGAAGGGTGACCGAGTTTCTTGGTTTCGAGGATGAAGTGCTCATTAACTTCATACACAGTCTTCTGGATGCTAAGGAAGTGAACGGGAAGGAAGTTCAAATACAAATAACTGGATTTATGGAAAAGAACACTGGAAAGTTCATGAAAGAACTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAGGAAGAAGAACTTTTGAAGAAGAAGGCTGAAAATGATCGGATAACCAGTGAAATTCAGAGGAAAAAGGATAAGGAAGGTAGAGATATTTTGGAAGAGAGGTTTAAGAAACTGGACGGTGGATTTGATTCCAAGGATAATGATACTGCTTCAGCTCCAAATTCAAAGTCGAAGGATTCAGGATATGATCGAGATGGAAAGGAACCTGAAAAGAGGAATGGTGTCAGGTCAAGGAGCAGACTTTCTAGGTCCCCACATTCACCTGCAGTTTCTACTTCACCTCATCGAGGCTCACCCTCAAGGTCAATGAGCAAATCATTTTCAAATTCCCGAAGTTATTCAGGTGGTAGACACAGGTCAAAAAGTATGTCTAGGTCTCCAACAGGTCGAGGACGCTCTCTTTCTTTTGAAAAGATTCACCGTTCTCCACGAAGACGATCTATTTCTCCTCATAGGCATTCACCACGACGTTCTCCCCATAGGAGGTCACTTTATTTGAGGAGAAGATCCGGATCTCGCTCAAGCTATAGATCTCCTACCCCTATACGGCGTAGAATTCATTCTCCAGTGCATCGAAGTTCACCTTCTTATCGACGTCGGAGGTCACCTTCACCAACAAGACGACGAAGGTCACCTTCACCAACGCGACGACGAAGATCACCTTCTCCAGTGCGACGACGTTGGTCACCTTCTCCAGTGCGACGACGCCGGTCTCCTTCTCCTGGGAGAAGACATAGATCTCCTTTGGTGCGACGACGTAGATCTCCGTCTCCTAATCGTCATCATAGATCACCGTCCCTTGGTCGTCGTCATAGATCACCATCCCCAGGGCACAGACATAGATCCCCATCACCTCTTGGAATGTGGAGATCACCCGGTCATAGACATAGATCACCATCACCTCTTGGACCACGAAGATCACCTTCACCTAGACGACGAAGATCACCTTCACCTAGACGACGAAGATCACTTGTCACTCGACATAGATCACCTTCTCCAGTGCGTCGAGTTCCACCAATCAGTGCTCGGAATAGATCAGAATCTCCCATGCAATCCCCCTCCCCCAAACAACGAAGGTATGGTAGTAGAACTCCTCCACACTCACCATCCCCATTGCGACACAGATCACCTATTCCTAGCAAGAATAGATCTCCAAGTATCTCCCCTCAGAGGTCTGCTGGAGATGAATGGAGTTCTCAGTCTCCAATACGACATGTTTCAACCTCTCCAAATAGGAAAAGTTCTCAAAGACAACAAAGAAGTCCCATACAGTCTTCTATAAGGAGAGTCAGGAGTAGCCCTGTGGGGTCTGTAGGAAGAGGCAAAGCTTTGAAATCGCAAGAGTCAATGTCCACTCCGGAGAAATCTCCAAATCGATCTGTATCTGCAGAAGCAAGGAGTGAGACCAGCAGTGAAGGTAGAAGTCCTCATGGGAACACTATGAAACAAAGAGAAAAGTTATCCAATAAAAGAAGCTTGAGTCCTTTAAAGAAACAAAGAACCCAGAAATCCAGCCATGAAAGCCCACAGACTAGAGATGAAGCAGAAGAAACATACTATTCCAGAGAAAGGAGGGATCCTAAAGTAAACTCATCCCAAAAGATAGTAAGACACTCACCAGCTAGTACGAGAAAAGGTTCACCTGCAAAACATGGTCATGAGGATGAGTTCTATCCTGAGAGGGATGCAGGTCATCCAGCTTCTGAACATAACAATGATTGGAGTAAGAAAGACCGGGAAATAAAAAGGGATAAGTCTTCTGGAAAAGGCAATGAATTTCTTTCTCAACAAAAGCCCTCTGTTAACAAGGAAACTTTTTCAAGAGAGAAGCCTCGTGAATCTTATGCTGTAGATATTAAAAAATCAGGTGACAAGGACCAATCCCGTTCAAATTATGCCAAAAGTAGTGATCGGCACCACAAATCAGAAGCCACTCCATATTTATTTGGAAGAGATGATATTGGCAATCAGAGTGCTTCACATGATTCTGTTTCTGAGGAAAGTGGTAAGCATAGACGAGAGGGCAAGGACAGGAAAAGGCATAAAAGATCTGAGAAAAAATATGCGTCTTCTGATGAGGATTATAGTTATGATTCTGAGATAGAGGACAGGAAAGAGGCTAAGAAGAGGAGAAAGGAGGAGAAAAAGTTGCGGAAGGAGGATAAGCGTCGAAGACGGGAAGATAGGCGTCGCAGAAGGGAAGAACGGCGTGCAGAGAAGCTGAAGCTGAAAAGTAAAACAGACAATATTTCAGATGACGAGGAAGCTGAACGAGATTATCATCAAAGTGATGGTGAAGAGACACCATCTGAGCAAAAGAAGCTTGAGATTGAATTGCGGAATAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGAATGAATAATTAA 2763 0.4473 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWVTRRVTEFLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAENDRITSEIQRKKDKEGRDILEERFKKLDGGFDSKDNDTASAPNSKSKDSGYDRDGKEPEKRNGVRSRSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSKSMSRSPTGRGRSLSFEKIHRSPRRRSISPHRHSPRRSPHRRSLYLRRRSGSRSSYRSPTPIRRRIHSPVHRSSPSYRRRRSPSPTRRRRSPSPTRRRRSPSPVRRRWSPSPVRRRRSPSPGRRHRSPLVRRRRSPSPNRHHRSPSLGRRHRSPSPGHRHRSPSPLGMWRSPGHRHRSPSPLGPRRSPSPRRRRSPSPRRRRSLVTRHRSPSPVRRVPPISARNRSESPMQSPSPKQRRYGSRTPPHSPSPLRHRSPIPSKNRSPSISPQRSAGDEWSSQSPIRHVSTSPNRKSSQRQQRSPIQSSIRRVRSSPVGSVGRGKALKSQESMSTPEKSPNRSVSAEARSETSSEGRSPHGNTMKQREKLSNKRSLSPLKKQRTQKSSHESPQTRDEAEETYYSRERRDPKVNSSQKIVRHSPASTRKGSPAKHGHEDEFYPERDAGHPASEHNNDWSKKDREIKRDKSSGKGNEFLSQQKPSVNKETFSREKPRESYAVDIKKSGDKDQSRSNYAKSSDRHHKSEATPYLFGRDDIGNQSASHDSVSEESGKHRREGKDRKRHKRSEKKYASSDEDYSYDSEIEDRKEAKKRRKEEKKLRKEDKRRRREDRRRRREERRAEKLKLKSKTDNISDDEEAERDYHQSDGEETPSEQKKLEIELRNKALESLKAKRGMNN* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0575 920 MobiDBLite consensus disorder prediction 432 454 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 840 856 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 183 202 - -
Vra2g0575 920 Gene3D PWI domain 33 125 - -
Vra2g0575 920 Coils Coil 123 150 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 569 602 - -
Vra2g0575 920 Coils Coil 822 869 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 728 772 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 269 293 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 164 903 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 603 617 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 857 903 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 625 657 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 469 489 - -
Vra2g0575 920 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 409 - -
Vra2g0575 920 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 369 916 - -
Vra2g0575 920 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 409 - -
Vra2g0575 920 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 369 916 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 309 403 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 500 557 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 811 839 - -
Vra2g0575 920 Pfam PWI domain 46 115 IPR002483 GO:0006397
Vra2g0575 920 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Vra2g0575 920 MobiDBLite consensus disorder prediction 672 714 - -
Vra2g0575 920 MobiDBLite consensus disorder prediction 205 256 - -
Vra2g0575 920 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Vra2g0575 920 SMART pwi_2 40 114 IPR002483 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0575 K13171 - gmx:100810238 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0575 2 4539377 4545973 Vra2g0575 2 4539377 4545973 ECH