Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0574 ATGACTCCCACTCTTACGTCCAATTCATCCCTCCTAACCACAACCCCCCATTCAAGGTTCAGCCTCCGGAACCCAAGGCTCAGAGTCTTCGCCAAGAAGTCGGGATCATTCCCATCATTTGGGCTTGGCAAACCCAAAGATGATTCGTCTTCTCCTGATGACAAAGATACCTCTCCCAATTCCAACCCCTTTCGTTTAGACTTTGGAAAGATACCCGATGTCACTTCCTTGATCCCAGTTCCAACCAACAATTCTTCGCCAGGCTTTTCATTTGGAAATCCAAGGCGCAAGGATCCTTCAACCGTCTTCGTTGCTGGCGCCACAGGCCAGGCTGGTATTCGCATTGCACAGACGCTTCTTAGGGAAGGTTTCAGTGTTCGGGCTGGAGTCTCCGAACTTGGCTCTGCACAGGAATTGGCTCGTCTTGCTGCTCAATACAAGATTATATCAAATGAGCAGGCAAAGCGTCTGAATGCTGTGCAATCAAGCTTTGATGACGCTGACTCAATAGCCAAAGCCATAGGCAACGCCAGCAAAGTGGTTGTCACCATTAGTTCCGCAGAGAACGGTCCAACAGCGGAGGTGTCAGCATCAGACGCATTGCAAGTGGTTCAGGCAGCTCAGTTGGCCGGAGTTGGCCACGTGGCTGTCATCTACGACGAGAACGGCGTTGGGGCGTCAACCTACAATGTACTGGATGGTTTCTCCTCCTTCTTCAACAATCTCTTCTCCCGGTCTCAACCCTTGACCATACAAGAGTTCCTACAGAAAGTTATTGAAACTGACGTCAAATACACCTTCATCAAGACAAGTTTGACCGATGATTTCGCTCCCGAAAGTTCCTACAATGTGGTCGTCTTGGGCGAGGGAAACACTAGTGCGAACGACTATAAAGTAGCGAAGTCCAAGATTGCATCCTTGGTGGCTGATGTCTTCGCCAATACTGAGGTAGCAGAAAACAAGGTCGTGAAAGTGTACTCGGATCCGAATGCCCCTTTGAAGCGTGTGGATGAACTTTTTAGTCCTATTCCCGAGGATGGAAGAAGGAAAGCCTATGCTGAAACGCAGGAGAAAGCAAAAGCAGAGGAGGCGGCAAGAGTGGCTGCAGAAAAAGCAAGTGAAGCAGCTGAATCAGCAAAGAAGTTGGAACAAGAGGTGAAAAAGCTTTCGCAGCAAGAAGCACTGGCTGCTAGTCTGGCCCAAGAGGCACAAGAGAAGGCAGAGGCAGCTGGAGCCTCTGTGGAAAACCTCTTGAACAAGGCAAAAGACTTTGGTTCAGGGTTTTCCTGGGAAAAGTTGAGCACACAGATTACTACTTCAATCCAAAAACCTGATGAGGATGAGAAACCAAAGGTTCAGCTAGCCACAGTAAGGGGACAGGCCAAGGCTCGGAACCTTGCGCCAAACAAAGCCGTGGTTAAACAAACTCCTCCAAGAAGAGCAGCTAGTAAACCAAAGGAGGAAAAACCGAAGAAGGCAGAGACAGCAAAAGAGGTGAGAAATGTATTTGGTGGCCTGTTCAAACAAGAGACTATCTATGTTGATGATGACTAG 1554 0.4878 MTPTLTSNSSLLTTTPHSRFSLRNPRLRVFAKKSGSFPSFGLGKPKDDSSSPDDKDTSPNSNPFRLDFGKIPDVTSLIPVPTNNSSPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVSELGSAQELARLAAQYKIISNEQAKRLNAVQSSFDDADSIAKAIGNASKVVVTISSAENGPTAEVSASDALQVVQAAQLAGVGHVAVIYDENGVGASTYNVLDGFSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFAPESSYNVVVLGEGNTSANDYKVAKSKIASLVADVFANTEVAENKVVKVYSDPNAPLKRVDELFSPIPEDGRRKAYAETQEKAKAEEAARVAAEKASEAAESAKKLEQEVKKLSQQEALAASLAQEAQEKAEAAGASVENLLNKAKDFGSGFSWEKLSTQITTSIQKPDEDEKPKVQLATVRGQAKARNLAPNKAVVKQTPPRRAASKPKEEKPKKAETAKEVRNVFGGLFKQETIYVDDD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0574 517 MobiDBLite consensus disorder prediction 458 496 - -
Vra2g0574 517 MobiDBLite consensus disorder prediction 1 68 - -
Vra2g0574 517 MobiDBLite consensus disorder prediction 480 496 - -
Vra2g0574 517 MobiDBLite consensus disorder prediction 1 21 - -
Vra2g0574 517 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 332 IPR036291 -
Vra2g0574 517 Pfam NAD(P)H-binding 106 314 IPR016040 -
Vra2g0574 517 Coils Coil 352 420 - -
Vra2g0574 517 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 517 - -
Vra2g0574 517 Gene3D - 93 334 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0574 - - gmx:100801140 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0574 2 4534049 4537529 Vra2g0574 2 4534049 4537529 ECH