LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0556	ATGAGCAATGAAAGGAGAATTGGGGTGGCTTTGGATTTCTCTAAGGGAAGTAAGATCGCTCTCAAATGGGCTATTGATAATCTTCTCCGCAACGGCGACACACTCTTCGTCGTCCACATCAAGCACTCCCAAGGCAGTGAATCCCGAAATCTTCTATGGTCCACCACTGGATCACCACTGATTCCGTTGTCGGAGTTTCGTGATAAGGATGTGATGCATCATTATGAGGTGGATTCTGATCCCGAGGTGTTGGACCTGCTTGACACCGCTTCTAAGCAGAAACAGGTGGCTGTGGTGGCAAAGCTGTACTGGGGCGATGCAAGAGAGAAAATTATTGAAGCTGTTGGGGATTTGAAGCTTCACTCTTTGGTCATGGGTAGCAGAGGCTTGGGTGCCATACAGAGGGTCTTGCTGGGGAGTGTGACCAATTATGTCACCATAAATGCAAGTTGCCCTATAACGATTGTGAAAGACTCTGCCCCTTCCACTATCTGA	495	0.4828	MSNERRIGVALDFSKGSKIALKWAIDNLLRNGDTLFVVHIKHSQGSESRNLLWSTTGSPLIPLSEFRDKDVMHHYEVDSDPEVLDLLDTASKQKQVAVVAKLYWGDAREKIIEAVGDLKLHSLVMGSRGLGAIQRVLLGSVTNYVTINASCPITIVKDSAPSTI*	165

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g0556	164	Pfam	Universal stress protein family	5	157	IPR006016	-
	Vra2g0556	164	CDD	USP_Like	6	156	-	-
	Vra2g0556	164	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	5	158	-	-
	Vra2g0556	164	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN	1	162	-	-
	Vra2g0556	164	Gene3D	HUPs	1	163	IPR014729	-
	Vra2g0556	164	PRINTS	Universal stress protein signature	4	22	IPR006015	-
	Vra2g0556	164	PRINTS	Universal stress protein signature	117	129	IPR006015	-
	Vra2g0556	164	PRINTS	Universal stress protein signature	135	157	IPR006015	-
	Vra2g0556	164	PANTHER	IMP2'P	1	162	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g0556	Vra-Chr2	4400852	4402585	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0556	4	46	Receptor kinase-like Gene Family	AT5G35380	48.837	6.53e-06	43.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0556	-		-	gmx:100306505	288.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra2g0556	2	4400852	4402585	Vra2g0556	2	4400852	4402585	ECH