Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0553 ATGAAATTGTTTATAAGGAGCTACTACCGATATGTTTCTTCACACCAATTTCATACTATCCATATGGAAATTCAAAGGCACCGTTTGGTTCTAATAACACCACCATTTCAGGGCCACTTAACTCCAATGCTTCACCTAGCCACCATCCTTCATTCAAAAGGGTTTTCCATAACGGTGGCACATGCCCATTTCAATTCCCCCGATCCTTCTAACCACCCTAACTTTTCTTTTCTTCCCTTGTTCTATGGTTTATCCGATACTCACATCTCATCCAAGAATGTTGTAGATATTACTGCAACCTTAAATACAAAGTGTGTGTCTCCAATCAAAGAGGCATTGATTCATCAGATTGAGAAAGCAAATATAAACCATGAAAAGATTGCTTGCGTCATCTACGATGGATTAATGTATTCCATTGATTCTGTGGCCAGAGAACTGAAACTACCCAACATAGTCCTCAGAACCACCAGTGCTACTAATTTTCTCACTTATCATGCATTTGTGCAGAGACAAAGCAGTGGCTGCCGTCCCTTGCAAGATTCTATGTCATTGGACTTGGTGCCAGAACTCGAACCACTCCGATTCAAAGACCTGCCAATGTTCAATTCGTGTGATATGCAGAAACAAATTGCTAAAACAATGGAAGTGAGACCTTCTTTGGGTGTTATCTGCAACACAGTGAATTGCCTTGAAGAGAAGTCCTTGTATAGGCTACACCAGGTGTACAAAGTCAGTTTCTTCCCCATAGGCCCTTTACACATGATTGCCGAAGAAGATTCTTCTAGTAGTAGCTTTGTGGAAGAAGATTACAGCTGCATAAGTTGGCTGAAAAAGCAACCAAAAAAATCGGTGTTGTACGTGAGTTTGGGGAGTATAGCAAGTTGGGAGGAGAAAGAGCTGACAGAAGTAGCTTGTGGCTTAGCAAATAGCAAGCAGAAGTTCCTTTGGGTTATCAGACCAGGGACAATCAGAGATGTTTCAGAATGGGTAGAATCACTGTGTAAAGATGTTAGAGTGGCAATAGCAGAAAGGGGTTGCATTGTGAAATGGGCACCTCAGGGTGAGGTTTTGGCAGACGAAGCTGTGGGAGGGTTTTGGAGCCATTGTGGTTGGAACTCTACGTTGGAGAGTTTGTGTGAAGGAGTGCCAATGATGTGCCAACCTTATTTTGGGGATCAGAGGGTAAATGCAAGGTTGTTGAGCCATGTATGGAAGGTAGGCCTAGAGTGGTCCAATGTCATGGAAAGGAATGAAATAGAAGTGGCAGTGAGAAGATTGATGGTGAATTCTGAAGGAAAAGAGATGAGGCAGAAAGCATTGAAACTCAAGAATGAAATTAAGATAGCTGTGAAAGATGGTTCTTCCTATGATGCCTTAAATAGGTTGGTCAAAACTATCTTATCAATTAATCTCTAA 1416 0.4174 MKLFIRSYYRYVSSHQFHTIHMEIQRHRLVLITPPFQGHLTPMLHLATILHSKGFSITVAHAHFNSPDPSNHPNFSFLPLFYGLSDTHISSKNVVDITATLNTKCVSPIKEALIHQIEKANINHEKIACVIYDGLMYSIDSVARELKLPNIVLRTTSATNFLTYHAFVQRQSSGCRPLQDSMSLDLVPELEPLRFKDLPMFNSCDMQKQIAKTMEVRPSLGVICNTVNCLEEKSLYRLHQVYKVSFFPIGPLHMIAEEDSSSSSFVEEDYSCISWLKKQPKKSVLYVSLGSIASWEEKELTEVACGLANSKQKFLWVIRPGTIRDVSEWVESLCKDVRVAIAERGCIVKWAPQGEVLADEAVGGFWSHCGWNSTLESLCEGVPMMCQPYFGDQRVNARLLSHVWKVGLEWSNVMERNEIEVAVRRLMVNSEGKEMRQKALKLKNEIKIAVKDGSSYDALNRLVKTILSINL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0553 471 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 25 467 - -
Vra2g0553 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 256 434 IPR002213 GO:0008194
Vra2g0553 471 Gene3D Glycogen Phosphorylase B; 270 449 - -
Vra2g0553 471 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 25 467 - -
Vra2g0553 471 CDD GT1_Gtf-like 28 463 IPR002213 GO:0008194
Vra2g0553 471 Gene3D Glycogen Phosphorylase B; 30 463 - -
Vra2g0553 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 28 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0553 Vra-Chr2 4371177 4373116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0553 27 463 Glycosyltransferase AT3G46670 45.516 1.48e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0553 - - gmx:100786860 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0553 2 4371177 4373116 Vra2g0553 2 4371177 4373116 ECH