Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0552 ATGTCGATTGTTCCAATGAACCAGGACGAGGGCAACGCTTTCAATCTATTGGCTCAGTGGGATCCGTTCCTTGATTTTCCTCTTCCTCCTTCCATCTCCAACTTCTTCCCCGGTTTCGGATTCGGATCCGGGTCGTCGGTGAACACACGTGTGGACTGGAGGGAGACACCCAGAGCGCACGTGTGGGAGGTGGCGCTTCCCGGCTTCACCAACGAAGACGTCCTGGTGGAGCTCCAAGACGAGAGGGTGCTCCAAGTGGGCGTGGAGAGTGGCAACTTCACGACCAGGTTCAAGATCCCCGACAACGCTAACCTCGAACAACTCAAAGCCAACATGCGTCACGGGGTTCTCGTTGTCACCGTTCCCAAGGTTAACCAACCCCTTCCTCCACCGCCTAGTAGGAATATCAGGGTCGTTGAAATCGACGGCACCGACTGA 438 0.5594 MSIVPMNQDEGNAFNLLAQWDPFLDFPLPPSISNFFPGFGFGSGSSVNTRVDWRETPRAHVWEVALPGFTNEDVLVELQDERVLQVGVESGNFTTRFKIPDNANLEQLKANMRHGVLVVTVPKVNQPLPPPPSRNIRVVEIDGTD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0552 145 SUPERFAMILY HSP20-like chaperones 26 127 IPR008978 -
Vra2g0552 145 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 142 IPR002068 -
Vra2g0552 145 Pfam Hsp20/alpha crystallin family 52 138 IPR002068 -
Vra2g0552 145 Gene3D - 15 139 IPR008978 -
Vra2g0552 145 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 144 - -
Vra2g0552 145 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0552 Vra-Chr2 4368042 4368804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0552 K13993 - gmx:100797426 201.445