Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0534 ATGGCTTCGTCACTCGCACTCCGATTCAGATCCCATCTTCTTCGCACCGCCTCACTCCTCCCCTCTTCCCTCCGCCGCCCTCCATTCCAACCCTCGTCGCCACTCCTCTCCGCCCAACGCCTCCTCTCCACGGCGCGCCGCTCGGCGCCACGCTCGCGGAAGTCGGTCGACATCGGCGCGCGCGCCCGGCAGCTCCAGACGCGGCGCCTCTGGGCCTACGCCCTGACTTTTAGCGGCCTCGCAGGGTTCGTGGTGATCGTGCTCAACAACTTTCAAGACCAGTTGGTGTTCTACATCACTCCCACAGATGCGCTTGAAAAGTACGCGACCAATCCCTCCAAGGCGCGGTTCCGGTTGGGAGGCTTGGTTCTCGAAGGCAGCGTGGTTTACCCGAAGTCGAAGCCGGAGGTGGAGTTCGTCATCACCGATCTGATCACTGACATCGTGGTCCGGTACGAGGGTTCCTTGCCGGACTTGTTCAGGGAAGGGCATTCCGTGGTGGCGGAAGGGATCGTGAAACCGTTCACGGAGGAGATCAAGAAGGAGGTGTCGACAAATAACGTGTCCGAGAAGGCGAGGAGATTAGAGTGTTATTTTTCTGCCGTGGAGGTTCTCGCTAAGCACGATGAGAAGTATATGCCGAAAGAAGTTGCCGCTGCTATTGAGAAGAATAAGAAGATTATTGAAGAAGCTGCCGCTGTCAGCGTAGCGGCGGAGGTACCCAAGACCACCTAG 735 0.585 MASSLALRFRSHLLRTASLLPSSLRRPPFQPSSPLLSAQRLLSTARRSAPRSRKSVDIGARARQLQTRRLWAYALTFSGLAGFVVIVLNNFQDQLVFYITPTDALEKYATNPSKARFRLGGLVLEGSVVYPKSKPEVEFVITDLITDIVVRYEGSLPDLFREGHSVVAEGIVKPFTEEIKKEVSTNNVSEKARRLECYFSAVEVLAKHDEKYMPKEVAAAIEKNKKIIEEAAAVSVAAEVPKTT* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0534 244 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 63 225 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vra2g0534 244 Gene3D - 91 221 IPR012340 -
Vra2g0534 244 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 236 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vra2g0534 244 SUPERFAMILY Heme chaperone CcmE 91 220 IPR036127 GO:0005886|GO:0017003|GO:0017004
Vra2g0534 244 Pfam CcmE 66 215 IPR004329 GO:0017003|GO:0017004|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0534 - - pvu:PHAVU_011G058400g 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0534 2 4229445 4232135 Vra2g0534 2 4229445 4232135 ECH