Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0533 ATGAAGAGGCTACACAGTAGCATTGGCATCCTTGATTTACGACCGCAGCTTGTGCTAATCGCATTTTGTCTCTTCACCTCTTCCTTCGGCTCCAAGATCGGAGAAACTTGCGGGTCGGACAACAAATGCGATGCAGGACTCAGCTGCCAGACATGTCCCGCGAATGGAAATACCCGACCGAGATGTTCGCGGATACAACCTTTGAATCCCAGTTCTAAGGTGAAAGGATTACCGTTTAACCGGTATTCATGGCTCACAACTCATAATTCTTTTGCTCTGGCCGGAGCTAGATCGGCCACCGGTTCCGTCATTTTAGCACCGATGAACCAAGAAGACACCGTTGCTGAACAACTCAAAAACGGCGTGAGAGGATTCATGTTAGATATGTATGATTTCCTAAACGATGTGTGGTTATGTCACTCCGCCCAAGGCACATGTTACAACTTCACTGCATTTCAACCTGCCATAAACGTGCTTAAAGACATGCGATCATTTCTAGATGCAAATCCATCTGAAATTATCACCATCTTCATAGAGGACTACGTCAAATCCTCTCAGGGTTTAACAAACTTGTTCAAAGCTTCGGGGCTAAGCAAGTACATGTTCCCAGTGTCTCGCATGCCCAAGAATGGCGGAGATTGGCCAACTGTTGATGATATGATACAGAAGAATCAGCGCCTAGTGGTCTTCACCTCCAAATCAGCCAAGGAAGCTTCCGAGGGCATCGCTTATCAGTGGACATACGTTGTAGAAAACCAATATGGAGATGAGGGGATGAAAGCTGGTTCTTGTCCAAGCCGTGCAGAATCTCCTGCAATGAACACAAAGTCTAGATCGTTAGTTTTGGTAAATTATTTTCATTCTGCTCCTAATCGAAGTCAAGCCTGTGCTGATAATTCGGCTCCACTGCTTGGCATGATGAAGACTTGTCATGATGCAGCCGACAGTCGTTGGCCAAATTTCATTGCTGTTGATTATTACCAGAGGAGTGATGGCGGAGGAGCACCAGAAGCAGTTGATGAAGCAAATGGCCATCTCACTTGTGGCTGTGGCAACATTGCCTATTGCAAGGCAAACGCTACGTTTGGCACTTGTGATGTTCCTCCCATTTCTCCACCTCCACCTGCGACAGAAACACCCTCCGACAACCAGCAGTCTCAAAATAATAATCATGCAAACAATGCTTATATTCGTAGAACAACCAAGTTGATGCAAACGGTTGTGGTGATTTTGGCGACGATAACTTTGTTGGCATGGTTATAG 1263 0.46 MKRLHSSIGILDLRPQLVLIAFCLFTSSFGSKIGETCGSDNKCDAGLSCQTCPANGNTRPRCSRIQPLNPSSKVKGLPFNRYSWLTTHNSFALAGARSATGSVILAPMNQEDTVAEQLKNGVRGFMLDMYDFLNDVWLCHSAQGTCYNFTAFQPAINVLKDMRSFLDANPSEIITIFIEDYVKSSQGLTNLFKASGLSKYMFPVSRMPKNGGDWPTVDDMIQKNQRLVVFTSKSAKEASEGIAYQWTYVVENQYGDEGMKAGSCPSRAESPAMNTKSRSLVLVNYFHSAPNRSQACADNSAPLLGMMKTCHDAADSRWPNFIAVDYYQRSDGGGAPEAVDEANGHLTCGCGNIAYCKANATFGTCDVPPISPPPPATETPSDNQQSQNNNHANNAYIRRTTKLMQTVVVILATITLLAWL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0533 420 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 78 186 - -
Vra2g0533 420 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 16 386 - -
Vra2g0533 420 PANTHER UNCHARACTERIZED 16 386 - -
Vra2g0533 420 MobiDBLite consensus disorder prediction 369 389 - -
Vra2g0533 420 Gene3D Phosphatidylinositol (PI) phosphodiesterase 67 343 IPR017946 GO:0006629|GO:0008081
Vra2g0533 420 SUPERFAMILY PLC-like phosphodiesterases 75 345 IPR017946 GO:0006629|GO:0008081
Vra2g0533 420 CDD PI-PLCc_At5g67130_like 69 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0533 Vra-Chr2 4224675 4229031 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0533 - - gmx:100798507 707.212