Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0522 ATGGAGAAGTACTTGGTTTCTCGTAAACCCTCGATTGAAAGTGTACGGCCACTTCCAAGGCAGTGGAAGAGGAGTTCGGTTGAACTGAATGGGAGATTTGAGCGTAACTATCGTCATGAGATGTTGGATCTGCTAATTCGATCGTATTCTGAGGTTGGAGTGTTTCCGCATCTGTATCAAGTAGATGGTTTGCCATGCCAGTCTCATACAAATCGATTGGTTGGTGAGGCAAATGGTGATGGCCATCTCCCACTTAGAAAGCAAGGCATCTCTGCTGTAGATTTTGACAAGAAGGGAATATACTTGGTGTCTGTTACAAAATCAGGGTGCTTAACAGTTCACGACTTTGAAACACTTTACTGCCAGATACCTGAGTTAACTTGCTTGCGAGAAGATGAAAGCAAACATTTAATGCACCTCTCCCTAAATCGACAACTTGATGCTGTCAGATGGAATCCTCTTAATCAGGACGAGGTTGTTTGTGCATCTGTCAAAAGTAATGAACTGCCCATATTCGATATTGGATATGTCTCATCCGATCCAGTTGAAGTGTTAAGAACAAGACGTACAGCCACAGTTAATGGATCCACTTTGCACAAAGGTCTCTCTGATGTCACTTTTACGTCAAATGACACAAGGATACTTGCTTCTGATACACATGGTGCAATTAATGTCTGGGATAGAAGAGTGAACTCTCTACCTTGTCTTGAGCTTGCGTCTGCTTCATGTGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTTTGGTGCTGGAAAACATGGGCTCGTGCATGTATGGGATATTCGTGGTGGAAGAGCATCTGCCACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCTGTAAAATCAGTGAAGTTGGCAACATTGCTAGAGAAGATTGGATCTTTGAAGGCACAGGCAAATATTATTCCCAAGGAGATTCACTCTATTAATGTTAATCCATCATGCCCATATCAGTTAGCATTCCATCTTGTCGATGGCTGGTCAGGCGTTTTGGATATTAATACTTTTGAAGTTACCCATATTCATTGCCCACCTCCTGCTTGGTTAAACGATTCCTACGTTCCCGCTGATCTATCATACTTAAGAAAACCTTCATGGTTATCAACTTGTTCGATCTATTTGGCCGGGTCATCATCTGATCGTGGTATCCATCTTTTGGATTTTTATCCCAGCACCAACTCACCGAGCCATGTTGATTACAAGGAGGATATGCAAGAACTTTCAAGGCGGAAAAACCGAAGTAATCAGAACAGATTTATTTCTTTATCTGAAGGAGTTATCTCATGTGTTGCTCACCCTTTGTATAATGCCATCGTGGCAGGAACCAAGAAAACTTCTTTGCTCGTGATTTCTCAAAGGCACGAGTCATTCAGAAGTGAAGATTAG 1422 0.4184 MEKYLVSRKPSIESVRPLPRQWKRSSVELNGRFERNYRHEMLDLLIRSYSEVGVFPHLYQVDGLPCQSHTNRLVGEANGDGHLPLRKQGISAVDFDKKGIYLVSVTKSGCLTVHDFETLYCQIPELTCLREDESKHLMHLSLNRQLDAVRWNPLNQDEVVCASVKSNELPIFDIGYVSSDPVEVLRTRRTATVNGSTLHKGLSDVTFTSNDTRILASDTHGAINVWDRRVNSLPCLELASASCGTLNSIQLNADNQIIFGAGKHGLVHVWDIRGGRASATFQSLKEICHPPVKSVKLATLLEKIGSLKAQANIIPKEIHSINVNPSCPYQLAFHLVDGWSGVLDINTFEVTHIHCPPPAWLNDSYVPADLSYLRKPSWLSTCSIYLAGSSSDRGIHLLDFYPSTNSPSHVDYKEDMQELSRRKNRSNQNRFISLSEGVISCVAHPLYNAIVAGTKKTSLLVISQRHESFRSED* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0522 473 Coils Coil 409 429 - -
Vra2g0522 473 SUPERFAMILY WD40 repeat-like 85 455 IPR036322 GO:0005515
Vra2g0522 473 PANTHER WD40 REPEAT PROTEIN 12, 37 1 472 - -
Vra2g0522 473 SMART WD40_4 232 271 IPR001680 GO:0005515
Vra2g0522 473 SMART WD40_4 70 115 IPR001680 GO:0005515
Vra2g0522 473 SMART WD40_4 186 227 IPR001680 GO:0005515
Vra2g0522 473 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 472 - -
Vra2g0522 473 ProSiteProfiles Trp-Asp (WD) repeats profile. 239 280 IPR001680 GO:0005515
Vra2g0522 473 Gene3D - 75 469 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0522 - - gmx:100780441 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0522 2 4080009 4090797 Vra2g0522 2 4080009 4090797 ECH