Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0503 ATGTCTCTAGTACAACAACTCTCAAATCTATCAATGGTCGTTTTAGTTTCTTCTCCTTTGGGCGTCATCATGTCTAAGAAAACTCAAACCTTTTGCAAAGGATCTTCCCCCAATCCCAACTCATCCACTTCCTCTCTTGAAGCTTCCCATTCCAAAGTTCGTGTCTTTGTCAGAAAAAATAAAAAACCCAGAAGCATGGCTGTCAAACTTGAAGAAGAGGACCATTTTCCATCAACCCAGGATCACAAGGTTCCGGTTACCCAGAAGTTTGGCCTTCCAGAAATTGAAGAATTTGCTTACTGTGGAGCAACTAAATTGACTCGGCGTGGAACGAGTTTTCATACATTTAGCTCTTTGTTTCCAGTGAAATCTGAAATTGAATCAGACGGTGCTTCAGTGACAAGTGAAGTTGGCTCAACTAGACCTTGTGGTGAATCACCTGCCCACTGGGAAAAGGTGCTTGAGGGGATTCGCAAAATGAGGTGTTCTGGTGATGCACCAGTGGATACTATGGGATGTGAGAAAGCTGGTGATACACTACCTCCTAAGGAGAGAAGATTTGCTGTCCTGGTATCTTCTCTTTTATCTAGCCAAACAAAGGATCATGTTACTCATGGAGCAATTCAACGCCTTCTTCAAAATGATCTGCTTACAGCTCAAGCTATCAATAATGTTGATGAAGAGACCGTCAAGAAGTTGATCTACCCTGTTGGGTTTTATACAAGAAAAGCCACTAACTTGAAAAAAATTGCAAATATTTGTCTGATGAAGTACAATGGAGACATACCAAGCTCAATTGACCAACTACTGTTACTTCCAGGCATTGGTCCTAAGATGGCTCATTTGGTTATGAATTCTGGATGGAACAATGTCCAAGGGATATGTGTAGATACTCATGTCCACCGCATTAGCAACCGGCTTGGGTGGGTCTCAAGACTGGGCACAAAACAGAAAACTTCAACACCTGAAGAGACAAGAGAGTCTCTGCAACGGTGGCTTCCAAAGGAAGAATGGGTTCCAATAAACCCTCTCTTGGTAGGGTTTGGACAAACAATTTGTACACCTCTGAGACCTCGTTGTGGAGAATGCAGTGTAAGAGACTTGTGTCCCTCTGCCTTCAAGGAGACCTCAAACTCAAGCCCATCTTCCAAGCCCAAAAAGCCCAGGCTGAACAAGAAGCCGTAA 1185 0.4329 MSLVQQLSNLSMVVLVSSPLGVIMSKKTQTFCKGSSPNPNSSTSSLEASHSKVRVFVRKNKKPRSMAVKLEEEDHFPSTQDHKVPVTQKFGLPEIEEFAYCGATKLTRRGTSFHTFSSLFPVKSEIESDGASVTSEVGSTRPCGESPAHWEKVLEGIRKMRCSGDAPVDTMGCEKAGDTLPPKERRFAVLVSSLLSSQTKDHVTHGAIQRLLQNDLLTAQAINNVDEETVKKLIYPVGFYTRKATNLKKIANICLMKYNGDIPSSIDQLLLLPGIGPKMAHLVMNSGWNNVQGICVDTHVHRISNRLGWVSRLGTKQKTSTPEETRESLQRWLPKEEWVPINPLLVGFGQTICTPLRPRCGECSVRDLCPSAFKETSNSSPSSKPKKPRLNKKP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0503 394 Pfam Helix-hairpin-helix motif 257 284 IPR000445 GO:0003677
Vra2g0503 394 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 91 393 - -
Vra2g0503 394 MobiDBLite consensus disorder prediction 372 394 - -
Vra2g0503 394 SMART ccc3 352 372 IPR003651 GO:0051539
Vra2g0503 394 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 353 369 IPR004035 -
Vra2g0503 394 CDD ENDO3c 187 349 IPR003265 GO:0006284
Vra2g0503 394 Gene3D - 284 375 IPR023170 -
Vra2g0503 394 Gene3D Hypothetical protein; domain 2 180 283 - -
Vra2g0503 394 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 91 393 - -
Vra2g0503 394 SMART endo3end 195 351 IPR003265 GO:0006284
Vra2g0503 394 Hamap Endonuclease III-like protein 1 [NTHL1]. 146 375 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Vra2g0503 394 ProSitePatterns Endonuclease III family signature. 260 289 IPR004036 -
Vra2g0503 394 MobiDBLite consensus disorder prediction 30 49 - -
Vra2g0503 394 Pfam HhH-GPD superfamily base excision DNA repair protein 191 332 IPR003265 GO:0006284
Vra2g0503 394 SUPERFAMILY DNA-glycosylase 165 385 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0503 K10773 - gmx:100818398 567.77