Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0492 ATGGCAACATCGTTATTCCGCACCATAAGGAGAGCATCCTCTGCTCTCAGATTTTCGTACGCCACCTCGTTTTCGGTCTCTCTCAGGTCAGTCGGGAGAAGCAATATGTGTGTGTTTTCTCCTTTGAGGCATCGTGTCTCGCTAGGAGAGCAAGGTTATTGGTGGGGTTTAAGAAATTTGAGCCATGGCAGGGTGAACCTTGTGATAACAGGAGGGAAGACCAGGTTTGAGACTCATGAGGTTGAGCCTCCTAAGAAAGACAAGTGGAAGACCAAGAAGAGATTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCGGCCAACAGGAAAGACCCTCGACGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCAGTGCAGATGAGAGAATTAAGTACAAGATTGAGAAGGCCAAAATTAAGGAAGCATTGCTCATTGAAAGGCTCAAAAGATATGAAGTTCCTAAACTTCAGGGTCCTGTTGTGAAGCCTGATAGTTTGACGGGGGAGGAAAGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAGTTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAGCCTGGTCAGGTACACGAGTATGCACAAGAACTTGCCAGATTGAGCGGCGGTATTCCACTTCAAATAATTGGAGATGACACTATAATATTTTATCGTGGAAAGAACTACGAACAGCCTGATGTTATGTCACCAATTGATACACTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTGAGGCGCTTCATTGCTATTGCTGAGAAAGAATTAGAGCTATATTACAGACACGTCGCACTTTATGGTGATCCAAACAACCGAAATCCCTTATCAATGCTGGACAGTCCAAGTGAAAACTCCAAGCAAAAAGGGAATCATAGAATTCAAGATAAAAAAATCCCTGACTTGAACAGTGACTATTTTTCAGCCAGTCTTTCAGAGACTGAAGCAGATTCCACGGAAATGGAGCTGTCAGAAACAGAAGATAGTTTTCAAGATGAAAGCTTGTCAATGAATGAATCAGATTCTGAAGAGGACAGCATGTCGGATTCCAATGGTAATCAAGAAAAGGAGGTATATTTTACTAAATTGCAATATGAAAGTGTAAGGTCAACCACAGGTTCTTCATCAATGGCTAAACGTAGCCACTATTACAATAATAGTAATAATAATCAATGTTTATAA 1311 0.4134 MATSLFRTIRRASSALRFSYATSFSVSLRSVGRSNMCVFSPLRHRVSLGEQGYWWGLRNLSHGRVNLVITGGKTRFETHEVEPPKKDKWKTKKRLKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFASADERIKYKIEKAKIKEALLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQVGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFYRGKNYEQPDVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNNRNPLSMLDSPSENSKQKGNHRIQDKKIPDLNSDYFSASLSETEADSTEMELSETEDSFQDESLSMNESDSEEDSMSDSNGNQEKEVYFTKLQYESVRSTTGSSSMAKRSHYYNNSNNNQCL* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0492 436 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Vra2g0492 436 MobiDBLite consensus disorder prediction 355 436 - -
Vra2g0492 436 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 396 IPR040286 -
Vra2g0492 436 MobiDBLite consensus disorder prediction 395 436 - -
Vra2g0492 436 MobiDBLite consensus disorder prediction 79 127 - -
Vra2g0492 436 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Vra2g0492 436 Coils Coil 92 112 - -
Vra2g0492 436 MobiDBLite consensus disorder prediction 361 391 - -
Vra2g0492 436 MobiDBLite consensus disorder prediction 89 106 - -
Vra2g0492 436 MobiDBLite consensus disorder prediction 314 342 - -
Vra2g0492 436 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Vra2g0492 436 SUPERFAMILY YhbY-like 170 265 IPR035920 -
Vra2g0492 436 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 396 - -
Vra2g0492 436 Gene3D - 170 268 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0492 Vra-Chr2 3775083 3778105 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0492 - - vun:114168415 686.026