Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0491 ATGGCCTCCGCCAATGCTCTTCCTCCCACCGGTAACGGTCTCGTCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACTGTTTCCGGCGTCTCCCTCGCCGAGGCCCCGGGTTTCCTCAAGGCTCCCGGAGGCGCTCCAGCCAACGTCGCCATCGCCGTCGCAAGACTCGGTGGCAAGGCCGCTTTCGTTGGCAAGCTCGGCGATGACGAGTTCGGCCACATGCTCGCCGGAATCCTCAAAGAGAACGATGTAAGATCCGACGGGATCAACTTCGACCAGGGTGCGCGCACTGCGCTCGCGTTCGTGACTCTACGCAAAGATGGAGAGCGTGAGTTCATGTTCTACAGAAATCCCAGCGCTGACATGCTCCTCACGCCTGAAGATCTCAACCTCGAACTCATCAGATCTGCAAAGGTATTTCATTATGGATCGATAAGTTTGATCGTGGAGCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTTGCGAGGGAAGCAGGGTGTCTGCTGTCTTACGATCCAAATCTGCGGCTACCGTTGTGGCCATCGCCTGAGGAAGCGCGTCAGCAAATACTCAGCATATGGGAGAAGGCTGATGTGATAAAGGTGAGCGATGTGGAACTGGAATTCCTAACCGGAAGTAACAAAATTGACGATGAATCTGCTCTCTCACTGTGGCATCCCAATTTGAAGTTGCTCCTTGTCACTCTTGGGGAACATGGTTCTAGGTACTATACCAAGAATTTCCATGGATCGGTGGACGCTTTTCATGTCAACACAGTTGATACAACTGGCGCAGGCGATTCCTTTGTTGGTGCTCTATTATGCAAGATTGTCGATGATCAATCCATACTTGAAGATGAAGCAAAGTTAAGGGAAGTACTAAAGTTTGCAAATGCGTGTGGGGCAATTACAACTACTAAAAAGGGAGCAATTCCCGCTCTTCCCACAGAGGCTGATGCTCTCAACCTGATCAACGAGAAAAACGGAAAGGAGGGTGTGCTTGAAGCCTTGAAAAGCAGGTGTATTATTCTGTGA 1044 0.5153 MASANALPPTGNGLVVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENDVRSDGINFDQGARTALAFVTLRKDGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAREAGCLLSYDPNLRLPLWPSPEEARQQILSIWEKADVIKVSDVELEFLTGSNKIDDESALSLWHPNLKLLLVTLGEHGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLCKIVDDQSILEDEAKLREVLKFANACGAITTTKKGAIPALPTEADALNLINEKNGKEGVLEALKSRCIIL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0491 347 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Vra2g0491 347 PANTHER BNAA04G18320D PROTEIN 20 324 - -
Vra2g0491 347 Gene3D - 13 336 IPR029056 -
Vra2g0491 347 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Vra2g0491 347 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Vra2g0491 347 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Vra2g0491 347 SUPERFAMILY Ribokinase-like 15 324 IPR029056 -
Vra2g0491 347 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Vra2g0491 347 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Vra2g0491 347 PANTHER HEXOKINASE FAMILY MEMBER 20 324 - -
Vra2g0491 347 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0491 Vra-Chr2 3767715 3771310 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0491 K00847 - gmx:100812560 636.336