Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0489 ATGGGGAAGCCTTTGTTTTACGAGATCTTGGAAAAACCTGCCACAAGTTGTATCATAGGATTATGCAGCATGATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACACGTGGGTCTGAGTTATGAGACGGCAGTGGAAGGGCATTATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCATTATGGAGTCTTGGAGTGGTAGAACAGCTTGGGCACTTAGGCCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGCTTATTGTATCAGGAGTTCTGGTTTTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGCTTGAGTATTTTCGTCGAGTGACAGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTGTCTGTAAAGCAACCATCTTCCAAGTTGGATCTCTTTGGGTTTCTTTCTCTCCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCGATCATCGTTCCTCAGGCAAGTTTTCTTGGCCATTTGTCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTCTCCTTGTTGGGATGGATTCTGCTTGTCTTTGTTTTTAGTTTGAAGAGATCTGGTGCTCTTGACCTAAGCTTTCTTGAGATCGAGTCTGTTACCGATCCTTCCTTACCTTCTGTGCGGTTTTTGGCATCAAGCACTGGCAGAACACTTCAGATGAGTGCTTTGCCAAATGGAAATGTTGATATTGTCTAA 816 0.4118 MGKPLFYEILEKPATSCIIGLCSMIWFYIQKKNIGYSHVGLSYETAVEGHYWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLLIVSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWILLVFVFSLKRSGALDLSFLEIESVTDPSLPSVRFLASSTGRTLQMSALPNGNVDIV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0489 271 Gene3D - 10 199 IPR035952 -
Vra2g0489 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Vra2g0489 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Vra2g0489 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Vra2g0489 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0489 Vra-Chr2 3760360 3761821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0489 - - gmx:100818954 518.464