Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0486 ATGGGGTTGGAATCGGTCGGAGATTTAGCCATTAACGCAATACTAAGGAAGTTAGAAGCCGAAGACATTGCCAGAGTTGCCTGTGCCAGCAAAAGGTTTAGGTCTTCTGCATCCGATGACACTCTTTGGATCAATCTCTGCTTCAATGAACTCGCTTTGACCCAACCCATCGATAATCTTGGAAACCCTTTCCCTTCTTTCAAGGAATGTTATCAAGCATGGAGAAAAGCTTTTGGAATGTATCCTTGGTCTCTTGTTAAGCGTGTGAAAAGGTGCTGGGATAGGATAAAAACCTGGTTGACCAATCATTTTCCTGAAGCTGAGGCCACACTTTGTAAAGGGGCAACTGAAGCTGATATTCAGATGTTGGAGAATTTGTTAAAGGTGGACTTGCCACTTCCTACGAGGATCCTTTATCGCTTCCATAATGGGCAAGAAATCGTAAAAGCAAATCTAGAAACTAGTACCTTTGGAAGTTCTTTGGGTCTAATTGGGGGTTACTCCTTCTATAATCATCTGGTGAATGTTTACCTATTGCCTATACATCAGATAATCCAAGAAACTCAGCAAATTAGGCGTCACTTGAGCTTTTTAAGAACATCCAAGTTTGTTCTTGTGGCTGCTTCCTCCACACTCCGTAGAAAATTGTTTTTCCTCAATTGTTCAAATGGTCAACTATATGTTGGAACCAATAAACTTCGTTCTGAAAAAGACATTATCCCTTGTGTACCTCAAGATCTGATAAGTTTACATCAGGAATCGAATGGTGAAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTAGAACATGGCTTCATCAAACTTTGTGAAAATGAATATGGCCGAAGCATTAATCTTTTCCCAGAAGAACCCCCTTTTTGTTCAACAGCTGTTACTAATGGTGTGAAGGTTCGCTCGTCTGCATTGATTATCCCTGAGTTTATTGATCCTCAAGATGACAGTGAAAAGTACTTATTTGCTTATTCGATCCGCTTGTCCCTTGAACCGCAAGGATGTTTGATTAATGGAATGTCCTTCAACTCTTGTCAACTCCATTGGAGGCACTGGATCATCCGTGCTAATGATGATGTTGTATCGGATGTCAGTGGAGAAGCTGTTATAGGACAGTATCCACTTTTGCATCCTGGTGGACAAGAATTTGTTTATCAGAGTTGCACTCCTCTACCAACGCCATCAGGCTCCATTGAAGGCTCTTTTACATTTATACCTGGCAGCTTGGCATACCCAAAAGGAGACCCTTTTCTAGCTACAGTGGCACAATTCCCTCTCCAGCTGCCAGACTACATTTTCTGA 1332 0.4197 MGLESVGDLAINAILRKLEAEDIARVACASKRFRSSASDDTLWINLCFNELALTQPIDNLGNPFPSFKECYQAWRKAFGMYPWSLVKRVKRCWDRIKTWLTNHFPEAEATLCKGATEADIQMLENLLKVDLPLPTRILYRFHNGQEIVKANLETSTFGSSLGLIGGYSFYNHLVNVYLLPIHQIIQETQQIRRHLSFLRTSKFVLVAASSTLRRKLFFLNCSNGQLYVGTNKLRSEKDIIPCVPQDLISLHQESNGEEQQDAMLLWLEEHGRRLEHGFIKLCENEYGRSINLFPEEPPFCSTAVTNGVKVRSSALIIPEFIDPQDDSEKYLFAYSIRLSLEPQGCLINGMSFNSCQLHWRHWIIRANDDVVSDVSGEAVIGQYPLLHPGGQEFVYQSCTPLPTPSGSIEGSFTFIPGSLAYPKGDPFLATVAQFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0486 443 Gene3D ApaG domain 299 443 IPR036767 -
Vra2g0486 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Vra2g0486 443 SUPERFAMILY SMI1/KNR4-like 92 168 IPR037883 -
Vra2g0486 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Vra2g0486 443 Gene3D - 8 96 - -
Vra2g0486 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Vra2g0486 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Vra2g0486 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Vra2g0486 443 Pfam ApaG domain 324 415 IPR007474 -
Vra2g0486 443 SUPERFAMILY F-box domain 13 74 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0486 K10290 - gmx:100809876 761.525