Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0484 ATGACGGTGGACGATCGGTTCGCACATTTGAACCCTAAGACGTGCGTGGTTGTAGGTGGCAGAGGATTCCTCGGAAGATCATTGGTCCTCAGGTTGTTGAAACTCGGTAATTGGATCGTCCGAATCGCCGATTCCGCTCACTCTCTCCAGCTCCATCACTCCGAGTCCATCCTCGCCCAAGCTCTCTCTTCCGCACGCGCTTCTTACTTCCACATCGACCTTACCGATAAATGCAACATTGTCAAAGTTCTAGGAGGTTCTTCTGTTGTGTTTTTTATGGATGTTGCTGGCGTTGATGTTAATGACTTCTATACTTGTTACAGGCTAATAGTTCAAGGAGCCAAGAATGTAATTAGTGCTTGCCGAGAATGTAGAGTGAAACGCCTAATATATAACAGTTCCGCGGATGTTGTATTTGATGGTTTGCATGATATTCGTGATGGAGACGAGTCGTTGGCCTATCCGTGGAAAACTGACAATATGTTGAGTGACCTTAAGGCTCAAGCGGAATCTTTGATCCTGAGTGTCAATGACATTGATGGCCTATTGACGTGCTCTCTTCGCCCTAGTAATGTTTTTGGACCTGGTGACACAGAATTTGTACCATATTTTCTCAAGTCAGCAAGATATGGTTTTGCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGATTTCACCTTTTCTGAAAATGTTACCCATGCCCACATCTGTGCCGAAGAAGCCCTAAATTTCCAAACAGTTTCTGTTGCAGGAAAGGCATTTTTCATCACGAATAATGAGCCAATAGAATTCTGGGAATTTCTTTCGCTTTTGTTAGAAGGTCTTGGATATCGAAGGCCATATGTCAAACTTCCGGCTAAGTTGGCTCAATATATTCTATCAGTTTTAAAGTGGTCGCATGAAAAGTTGGGATCCAGATACTTCAGCTATCCTTTATTAGTTCACTTTTTTCAGTTAGCTTCGTACACCCGTACTTTCAACTGCACGAAAGCTCACAAACATATTGGATACTCACCAATAGTCTCCCTCGAGGAAGGAGTCACATTGACAATAGAATCATTCTCTTATTTATCCAAAGACTCATGTTTATCAAGAAGCTTCAGTTCCACTGAACAGTCAAAAGCGGATAAGTTGCTTGGTGGAGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGAAATCATTTACATATTTTGCTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCAAAACTTTTGCTGCTTGCCACATTACTTTTTTACGGACATGGTTTTCTGCCGTCAAAGTTGTTTGGTTTTAATATACAAAGGATACCCTTTTCTTGTTTTGAGATCTCTGATGCGGTAGTGAAAGATTCAGTTATAACCACAGTGTATATCTGGAATAAGGGTTTTCAAATAATAAGAAGATTGGCCCATGGGGAAGACTGGTCTGCATTCTTCAAGATTGCAATTTTTCTTTACCTTATGAAGATCTTCCTGCCAAAGATGTTGACAAAATTGATAGGCATAGGTTTGGTGTTCGCATTTATGGGATTTTTTGTGTACGAGCAATATGAATCAGAAATTGATGGAATGGTTGATGTTCTTTTCACCAGTTTGAAAGAGTTCATGATATATTTGATGAGAATTTCTCCTGTTTTTAAATCGAGGCTTCTGCGTTATCATGACAACTTTCAGCGGTATGAAAAGAATGGTTAA 1740 0.4023 MTVDDRFAHLNPKTCVVVGGRGFLGRSLVLRLLKLGNWIVRIADSAHSLQLHHSESILAQALSSARASYFHIDLTDKCNIVKVLGGSSVVFFMDVAGVDVNDFYTCYRLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAESLILSVNDIDGLLTCSLRPSNVFGPGDTEFVPYFLKSARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNNEPIEFWEFLSLLLEGLGYRRPYVKLPAKLAQYILSVLKWSHEKLGSRYFSYPLLVHFFQLASYTRTFNCTKAHKHIGYSPIVSLEEGVTLTIESFSYLSKDSCLSRSFSSTEQSKADKLLGGGKVADILLWRDEKKSFTYFAVLVLLFYWFFLSGRTFISSAAKLLLLATLLFYGHGFLPSKLFGFNIQRIPFSCFEISDAVVKDSVITTVYIWNKGFQIIRRLAHGEDWSAFFKIAIFLYLMKIFLPKMLTKLIGIGLVFAFMGFFVYEQYESEIDGMVDVLFTSLKEFMIYLMRISPVFKSRLLRYHDNFQRYEKNG* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0484 579 Pfam Reticulon 385 541 IPR003388 -
Vra2g0484 579 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 493 - -
Vra2g0484 579 ProSiteProfiles Reticulon domain profile. 385 576 IPR003388 -
Vra2g0484 579 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vra2g0484 579 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 11 493 - -
Vra2g0484 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 355 IPR036291 -
Vra2g0484 579 Gene3D - 5 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0484 Vra-Chr2 3722840 3728782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0484 13 352 Lipid Metabolism Gene Families AT2G33630 29.700 1.02e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0484 K23558 - gmx:100794808 948.732