Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0480 ATGCCTCGTTACAAGGACGAGTCCCCTGCAGTTCGGGTTTACACTGTCTGTGATGAATCCAGATATTTGATTGTGAGGAACGTTCCAGAATTAGGATGTGGTGATGATTTGCTGCAACTTTTTTCATCCTATGGAGAAGTCGAGGAGTGTAAGCCCATGGATGCAGAAGACTGTGAGAAATACACTGATGTCTACTGGATCAAATTCCGCCTTGTCAGCAATGCTAGGTTTGCAAAAAGAAAATTGGATGATTTTGTTTTCTTCGGGAATAAACTGCAGGTTTCATATGCCCCCCAATTCGAGACCCTATCAGACACACAAGATAAATTAGAGGGTAGAAGAAGGGAGGTTTTAGCGCGATTGAACCGTAAGTTAGAGCAGTTCAGTGGTAGCATACCACACGCAGCTAGAAGATCTAAAGAGACCCTAGCCACAAGCTCTAAAGAGACCCCAGCCACAAGCTCTGATGCTATGATTACATCAAATGTCAATAGTGCACAACATTTAGATTCTAATGCTTGGGATGTAGAATTCAAAGGAGGTTCACGCAGTAGTAATTTTCCAACAAGGATTTCCTCTAATGAGGATTATTTTGCTTCACAGTCCATGAATCGAACAGTAAATTTTGTACGGGATAAGCTTGATAAGGTGATCTCTCCTACTTCATAG 669 0.42 MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDDLLQLFSSYGEVEECKPMDAEDCEKYTDVYWIKFRLVSNARFAKRKLDDFVFFGNKLQVSYAPQFETLSDTQDKLEGRRREVLARLNRKLEQFSGSIPHAARRSKETLATSSKETPATSSDAMITSNVNSAQHLDSNAWDVEFKGGSRSSNFPTRISSNEDYFASQSMNRTVNFVRDKLDKVISPTS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0480 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
Vra2g0480 222 MobiDBLite consensus disorder prediction 133 156 - -
Vra2g0480 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 92 IPR000504 GO:0003723
Vra2g0480 222 CDD RRM_RBM48 11 110 IPR034264 -
Vra2g0480 222 PANTHER UNCHARACTERIZED 3 217 IPR039599 -
Vra2g0480 222 Gene3D - 16 114 IPR012677 -
Vra2g0480 222 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0480 K24824 - gmx:100527829 327.791