Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0479 ATGGCTAACCCTTCTGGGAATCACGAAGAAGAGCAGACAACCCATGTTGCGTCGTCGTTCAACGGGAATTTGGCAGCCGACACTTCGCCCACCGCGCTCGCCATGAAGCACAACTCTGGCATCGCCCTCGATTGGACCCCTCAAGAACAAACCATTCTCGAAGAAGGACTCTCTCTGTTTGCTTCTGAACCTAATCTCACTCGCTATGCAAAGATAGCAATAAATCTAAATAACAAGACAGTCCGGGATGTAGCACTGAGGGTCAGGTGGATGAATAAAAAGGAAAATTGCAAGAGAAGGAAGGACGAATTTTCAAGGAAAAGTAAAGATAGAAAGGAAAAGGTTTCAGATCCTGCAGTGAGATCATCTCACTTTACTGCTCAATCTAATGTTTCCCCATATTCTCCTGCAATGAAGATGATGGACAATGATGACAGCATCTGTCATAAAGCTATTGGAGGCCCTGCAGGAGAGCTCTTAGAGCAAAATGCACAGGCCTTGAATAACATCTCTACCAATCTTGCTGCTCTTCAGTTTCAGGAGAACATCAATCTTTTCAGCAAAACGAGAGACAACATTATCAAAATTTTGAATGACATGAATGACATGTCAGAGGCAATGAAGCAAATGCCACCTCTACCTTTTAAGATCAATGAAACGATATTCAGCTCCATAATTCCAAACACCATTCACCAGATGCTATAA 705 0.4312 MANPSGNHEEEQTTHVASSFNGNLAADTSPTALAMKHNSGIALDWTPQEQTILEEGLSLFASEPNLTRYAKIAINLNNKTVRDVALRVRWMNKKENCKRRKDEFSRKSKDRKEKVSDPAVRSSHFTAQSNVSPYSPAMKMMDNDDSICHKAIGGPAGELLEQNAQALNNISTNLAALQFQENINLFSKTRDNIIKILNDMNDMSEAMKQMPPLPFKINETIFSSIIPNTIHQML* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0479 234 PANTHER BNAC03G35350D PROTEIN 21 232 - -
Vra2g0479 234 Gene3D - 45 117 - -
Vra2g0479 234 MobiDBLite consensus disorder prediction 97 124 - -
Vra2g0479 234 MobiDBLite consensus disorder prediction 97 119 - -
Vra2g0479 234 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 21 232 - -
Vra2g0479 234 CDD SANT 45 94 IPR001005 -
Vra2g0479 234 Pfam Protein of unknown function (DUF3755) 177 209 IPR022228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0479 Vra-Chr2 3680801 3686605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0479 - - gmx:100775443 399.053