Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0460 ATGGCTTCGCTTCTGAAAAATCTACGTCCCGGTGTGCCTTCAGTTCATGATGCTGGTGATGATTTCAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGTCCTCCTCTTGGCTACTCCGTCCCAGAAGTTCTTCCTTTCAACCTTGACCAAGTCCCTTTTGCACCTGTTGCTCAATCTCCCCCTCACAACTTGTCCCTCCCAGTTATCCAACCCTTTAGAAAAACCAATGCAGAATTGGCTTCAAAAACTGCTTCTGTTTCTTCTGATCATCTGTCACGCGAACAAGGGGATCATGATGATGATGACGACGACCCTTTAAACCCAAAACATGTTAAACGGCCCTCCGTGGTGACTTTTCGTCATCCTGAGACAAATGAGATAGTGGAGGATGAAGAGATTGTTGAACCTGCAAGTGGAGAAAGTAGTAGTAGTAACAATAGTAAACGTGTGAGGCCGCATGCCGAGAGAGTTGGGAAGAAGGGTTCGTGCTATCGATGTCTTAAAGGGAGTCGTCTAACTGAGAGGGAGGTTTGCATTGTTTGCAGTGCAAAGTTTTGTCGCAACTGTGTGCTTAGAGTAATGGGATCCATGCCTGAAGGCAGAAAATGTGTCACTTGCATTGGTCATAGAATTGATGAGAACAAGCGAGGGAGGCTTGGAAAACCTTCTCGGATGCTCAAGTACTTGTTGTCTAAGGGGGAAGTGAAACAAATCATGAAGGATGAGATGTTTATTGAAACAAATCAAATACCAGCAGAAGATGTTATTGTGAATGGAGAACCTCTTGACTGGGATCAGCTCACGCTGCTTTTGACCTGTTCAAACCCCCCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAAGCATCTGGCTTTTGGGGAAAGGAAGGTCAACGACCATGTCAAATTATTAGCCCACAGTTGGAAGTTGGGGGCCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGAAGTAACTATAAATGGTCGAGAGATTACCAAAGAAGAGCTATGGATACTGAAGTGGGCAAGAGTGCCATGTGATGGAACAACTGACTTTTGGGTGAGCCATGATGGATCATACATGGAAGTGGGACAGAAGAATGTGAAGGGGCATATATGGGAGAAGTCTACAGTGAAGTTTGCTTCTCTAATTCTATCCCTGCCAGTTCCTTCTAGCTCCTTAACTCCTGCCGGCGAAGCAGAAAGTGGAATTAGCAAACACAACATTGAACAGAAAATGCTTCACAAATATTTACTTGTCGGTTCTGTCAATTCTGGAACATGTACCATATATAAACAGGCCAGGCTTCTGTATAATGTTCCTTTCTCTGGAACCGAGCTTCACAACATAAAGCTGGTAATTCAAAGAAACTTGTATAGGTACCTTGGTATCATACTAGAGGCGCGAGAAATTTTTGAAGAGAGTTTGTATAAAAAAAGTAACGAACAACATGTTGGTGAATCAACTTCTTCTGGGACTACTGGAGAAATTATTGACACGACAACCTATTCCATTAGTCCAAGACTAAGAGCTTTCTCCGATTGGATACTCCAATACATGATGTCTGGCAACTTGGATGAAATATTTCCAGCAGCTGCTCGTGAATATGCCCCACTGGTGGAGGAACTGTGGAGGGATGCAGCCATTCGGGCCACGTACAACAGGAGAAATGAAATAAAAAATCTGCCAAAAACTGCTAGCTATTTTCTTGAGCGGTCTGTTGAAATTTCCAGGATAGATTATGAACCCTTGGACATGGACATCTTGTATGCTGAAGGGATAACCTTATCCAATGGCCTTTCTTCCATGGAATTTTCATTTCCTGTGTCAGCTCATGAGGACTCATTGGACCCTGTTTATCGACATGATCCTTTGCTCAGGTATCAGCTCATCAGAGTACATCCAAAAAGCCTCGGAGAAAAGTGCAAGTTGTTGGACATGTTTGAAGACACTGATGTAGTGTTGTTCTCAGTGGCCTTAACTGACTATGATGAGTACACGGTAGACAGTAAAGGAGCTGTTAGCAACAAAATTTTAGCAGCCAAACATCTCTTTGAAAACATCATCACTCATAGAGTGTTCAGCAACACGAAATTTCTTCTCATATTGACCAAGTTTGATCTGTTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAGTGTGAATGGTTTTTGGACTTCGATCCAGTTATTAGCCACAATCATAAAACCGCCAGTATTAGCAAACGTAGCAACCATCCTCCACTAGCTCAACGTGCTTTTCAATACATTGGTATGAAGTTCAAGAGCTGGTTCAATTCTCTAACTGGTCGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACCTTCTACTGTTGATGAAGCTCTTAGATATGCAAGAGAGGTTATGGTGTGGCAAAAATGGGACCCCTCTTTGAGAAATGAGAAGTCTGAGATAACATCCACAACTTTTGAGGCAAGCTCTGAAGAAAAATATAATAAACTATAA 2499 0.4254 MASLLKNLRPGVPSVHDAGDDFSYEYSFAEEYKGPPLGYSVPEVLPFNLDQVPFAPVAQSPPHNLSLPVIQPFRKTNAELASKTASVSSDHLSREQGDHDDDDDDPLNPKHVKRPSVVTFRHPETNEIVEDEEIVEPASGESSSSNNSKRVRPHAERVGKKGSCYRCLKGSRLTEREVCIVCSAKFCRNCVLRVMGSMPEGRKCVTCIGHRIDENKRGRLGKPSRMLKYLLSKGEVKQIMKDEMFIETNQIPAEDVIVNGEPLDWDQLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEVGGHLQRNASNGKTEVTINGREITKEELWILKWARVPCDGTTDFWVSHDGSYMEVGQKNVKGHIWEKSTVKFASLILSLPVPSSSLTPAGEAESGISKHNIEQKMLHKYLLVGSVNSGTCTIYKQARLLYNVPFSGTELHNIKLVIQRNLYRYLGIILEAREIFEESLYKKSNEQHVGESTSSGTTGEIIDTTTYSISPRLRAFSDWILQYMMSGNLDEIFPAAAREYAPLVEELWRDAAIRATYNRRNEIKNLPKTASYFLERSVEISRIDYEPLDMDILYAEGITLSNGLSSMEFSFPVSAHEDSLDPVYRHDPLLRYQLIRVHPKSLGEKCKLLDMFEDTDVVLFSVALTDYDEYTVDSKGAVSNKILAAKHLFENIITHRVFSNTKFLLILTKFDLFEEKIEQVPLTQCEWFLDFDPVISHNHKTASISKRSNHPPLAQRAFQYIGMKFKSWFNSLTGRKLFVSLVTGLEPSTVDEALRYAREVMVWQKWDPSLRNEKSEITSTTFEASSEEKYNKL* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0460 832 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 101 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra2g0460 832 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 15 81 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra2g0460 832 Pfam G-protein alpha subunit 409 799 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra2g0460 832 ProSiteProfiles G-alpha domain profile. 416 815 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra2g0460 832 MobiDBLite consensus disorder prediction 80 155 - -
Vra2g0460 832 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 15 81 - -
Vra2g0460 832 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 101 825 - -
Vra2g0460 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 804 IPR027417 -
Vra2g0460 832 SUPERFAMILY Transducin (alpha subunit), insertion domain 445 594 IPR011025 GO:0007165
Vra2g0460 832 MobiDBLite consensus disorder prediction 92 128 - -
Vra2g0460 832 Gene3D - 447 595 IPR011025 GO:0007165
Vra2g0460 832 Gene3D - 629 801 IPR027417 -
Vra2g0460 832 SMART galpha_1 397 762 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0460 Vra-Chr2 3562976 3567211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0460 - - gmx:100791124 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0460 2 3562976 3567211 Vra2g0460 2 3562976 3567211 ECH