Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0455 ATGTTTAAGAAAATGGGTTTTGAAGAAGAAGCAGTTGTGCAATTGATCAATTCTGATTTCAGAGACCTAAGTGTAGCTGCTAATCAATTAGCCAATCACGTGGTCAAACTTGGTGGCATAGGCTTTGGAGCTTCTTTTTTCGGATTGATTGCTGCCATTGCTGCTATTTATCTGTTAATTTTGGATCGTACAAACTGGAGGACTAATATTCTCACAGGACTACTCATTCCATACATTTTCTTCAGCTTGCCTTCGATAATTTTTGCCGTCTTCAGAGGAGAGATTGGAAAATGGATTGCTGTCATTGCTGTTGTATTGCGCCTTTTCATTCCAAGACACTTCCCTGATTGGCTGGAATTGCCGGGTGCTTTGATTCTTCTTATCGTTGTAGCTCCTTCTCTATTTGCAAACACCTTTAGAAACGACATTGTCGGGGTGGTAGTGTGTCTCATCATTGCATGCTATCTGCTGCAAGAACATATTCGAGCTTCTGGTGGTTTTAGAAACTCCTTCACTAAAGCCCATGGCATATCAAATTCCGTTGGCATAATACTTCTGTTAGTCTATCCCATCTGGGCGTTGGTGGTCATACTTTTTTAG 600 0.41 MFKKMGFEEEAVVQLINSDFRDLSVAANQLANHVVKLGGIGFGASFFGLIAAIAAIYLLILDRTNWRTNILTGLLIPYIFFSLPSIIFAVFRGEIGKWIAVIAVVLRLFIPRHFPDWLELPGALILLIVVAPSLFANTFRNDIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSVGIILLLVYPIWALVVILF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0455 199 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 2 198 - -
Vra2g0455 199 Pfam Cold acclimation protein WCOR413 8 186 IPR008892 GO:0016021
Vra2g0455 199 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 2 198 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0455 Vra-Chr2 3517732 3520568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0455 - - gmx:100811430 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0455 2 3517732 3520568 Vra2g0455 2 3517732 3520568 ECH