Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0450 ATGGATGAAGTACCTGGCTCCTTGGGCACCAGCGCTAGCTTCAGTCTGAGAATGGGCCAGACCATGTTCTCATCTGCTTCCCTTCTCTTCATGTCTTTTGGGGTTGAATTCTACAGCTACACGGCTTTCTGCTATTTGGTGACAATTATGGGGTTGGTCATACCGTGGAGTTTCACATTAGCACTAGTAGATGGATATTCGGTTCTGCTCAAATGCCCCATTCGTCAACCAGGAATTCTGCTGATTATTGTTGTGGGAGATTGGGTACTATCAACCCTCACACTAGCAGCAGCTTCCTCAACAGCTAGTGTTGTGGATCTTCTGCTCAACACTCACGGGTCTTTTTGCCCTCCAAAGCTCTGCAGCAGGAGCAAAGTACCCCTTGAGTCCAATGAATGTCACGCTCAACTTCATAGCAGATACAAGATTGTAAAATACTAA 441 0.4649 MDEVPGSLGTSASFSLRMGQTMFSSASLLFMSFGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLLKCPIRQPGILLIIVVGDWVLSTLTLAAASSTASVVDLLLNTHGSFCPPKLCSRSKVPLESNECHAQLHSRYKIVKY* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0450 146 PANTHER CASP-LIKE PROTEIN 5C3 1 126 - -
Vra2g0450 146 Pfam Casparian strip membrane protein domain 9 116 IPR006702 -
Vra2g0450 146 PANTHER CASP-LIKE PROTEIN 5B3 1 126 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0450 Vra-Chr2 3494329 3499013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0450 - - gmx:100810360 218.779