Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0449 ATGAAATACAGTGAGATATCCCATTTCAGCCACCCACAACACAAGCTGAGATTTGAGTACTCAGAATTCCCCTTCAAATGTGACGGCTGCAAGGAAGTAGGCATAGGGTCGCGTTACAAATGCTCCATCTGTGACTTCGACCTTCACATGCACTGTGCCATGATAACCTCTCCCAGTTTGTTCCACCCTTTCTACACCAAATGCACCTTCCAGTTCATGTCCAAACCTCCAGGAGACACACCCCGTTACTGCAACGCATGCGAGAAGGACGTGAGTGGCTTCGTGTACCACTGCAAAGCATGCGGCTTCGACCTCCATCCTTGTTGTGCCAAGCTACCAATGGTTCTTGATGATGGTGAAGTGAAGCTTTACTTGTACAGAAAAGTTAGCTCACCCTGTCACCGTTGTGGCAGAAAAGGTCGTAGCTGGAGTTACAGGTCCAAGTGTAAGAACTACAATCTGCATGTGGCGTGTGTGAGGGAGATGTTGGTGGAGAATTGGCACGAGGTGTATGTTGGACGCTGCAAAGGAAGGAATGTTGATAGCAACATTCCTAGTCTGAGAAACACACTCTACACTCCTCATAGCAGTAGGAGGAGTAAAGGGAAGGTGAAGAAATGCTGTGAAATTGCTGGTTTCGCTGTGCAGATTGTGATATCAGCTGTGTTGGGAGATCCAACGGCTCTCATTGCAGGCATTGTGGGGTCCTTCATGTCAAGGGCTTGA 726 0.4835 MKYSEISHFSHPQHKLRFEYSEFPFKCDGCKEVGIGSRYKCSICDFDLHMHCAMITSPSLFHPFYTKCTFQFMSKPPGDTPRYCNACEKDVSGFVYHCKACGFDLHPCCAKLPMVLDDGEVKLYLYRKVSSPCHRCGRKGRSWSYRSKCKNYNLHVACVREMLVENWHEVYVGRCKGRNVDSNIPSLRNTLYTPHSSRRSKGKVKKCCEIAGFAVQIVISAVLGDPTALIAGIVGSFMSRA* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0449 241 SUPERFAMILY Cysteine-rich domain 4 56 IPR046349 -
Vra2g0449 241 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 13 68 IPR002219 -
Vra2g0449 241 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 240 - -
Vra2g0449 241 Gene3D - 17 66 IPR043145 -
Vra2g0449 241 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 2 240 - -
Vra2g0449 241 Gene3D - 78 112 - -
Vra2g0449 241 Pfam C1 domain 9 53 IPR004146 -
Vra2g0449 241 Pfam C1 domain 74 110 IPR004146 -
Vra2g0449 241 SUPERFAMILY Cysteine-rich domain 60 116 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0449 Vra-Chr2 3490429 3494196 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0449 - - gmx:100790779 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0449 2 3490429 3494196 Vra2g0449 2 3490429 3494196 ECH