Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0446 ATGGATGGAAGAGTTTTCACAGAAGAGCAAGAAGCTCTCGTGGTCAAATCATGGGCAGCAATGAAGAAGAATGCTGCAGAACACAGTGTCAAGTTTTTCAAAAAAATATTGGAGATTGCTCCTGCAGCTCGGCCACTGTTCTCATTCTTGAAAGATTCTAACGTTCCTTTGGAGGAAAACCCGAAGCTCAAGCCCCATGCCATGGCTGTCTTTGTCATGACCTGTGACTCAGCTGCTCAACTGAGGAAAGCTGGTAAAGTGACTGTGAGGGAATCAAACTTGAAAAAATTAGGTGCTTCTCATTTTAAAGCCGGTGTTGCACCGGAGCATTTTGAGGTAACAAAAATGGCACTTTTGGAGACCGTAAAAGAAGCAGTGCCTGAAATGTGGTCAGAGGCAATGAAGAATGCATGGGAAGAAGCTCATGATCAGCTGGCTGATGCCATCATATCTGAAATGAAGCCCTCTTCTTAG 474 0.4451 MDGRVFTEEQEALVVKSWAAMKKNAAEHSVKFFKKILEIAPAARPLFSFLKDSNVPLEENPKLKPHAMAVFVMTCDSAAQLRKAGKVTVRESNLKKLGASHFKAGVAPEHFEVTKMALLETVKEAVPEMWSEAMKNAWEEAHDQLADAIISEMKPSS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0446 157 ProSiteProfiles Globin family profile. 6 154 IPR000971 GO:0020037
Vra2g0446 157 SUPERFAMILY Globin-like 6 154 IPR009050 -
Vra2g0446 157 PRINTS Plant globin signature 7 24 - -
Vra2g0446 157 PRINTS Plant globin signature 32 52 - -
Vra2g0446 157 PRINTS Plant globin signature 60 88 - -
Vra2g0446 157 PRINTS Plant globin signature 125 151 - -
Vra2g0446 157 PANTHER NON-SYMBIOTIC HEMOGLOBIN 4 155 - -
Vra2g0446 157 ProSitePatterns Plant hemoglobins signature. 60 71 IPR019824 GO:0019825|GO:0020037
Vra2g0446 157 Gene3D Globins 5 151 IPR012292 GO:0019825|GO:0020037
Vra2g0446 157 Pfam Globin 31 149 IPR000971 GO:0020037
Vra2g0446 157 PANTHER LEGHEMOGLOBIN-RELATED 4 155 IPR001032 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0446 Vra-Chr2 3480702 3481624 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0446 - - gmx:100809295 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0446 2 3480702 3481624 Vra2g0446 2 3480702 3481624 ECH