Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0440 ATGGATAACATCATCAAAACTAAGCTTCACATTCTCAATCCTCCATATCCTTCTACCTGTCTGTCTATGGAGGCTTTCTCCCTACAGTCCCTCACTCTAACCACCATCCCCTCCTCTTTGTCACAGAGAGGGGCCACTGAGAAATCTTCTGCCCATGTCAATCTTTCCCATTTCACAAGGTACCCTTCTTCCACAACATCCACAAAACACAGAATTCGTTGCACCACAACTCAAGCTTCAGGTTCAACTAAATCTAGTGTGGGTACTGCTGAGGGGATATCTGAGGAAACAGACTCCAAGGATGACAACTTGGTATTTGTTGCGGGTGCTACTGGTAAAGTTGGTTCACGGACAGTGAGGGAGCTGATAAAGCTTGGATTTAGAGTCAGAGCTGGAGTGCGAAGTGCTCAGAGGGCGGGTGCATTAACTAAGAGTGTTCAGGAATTGAAGCTTGATGGTTCAAGTGCAACTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTAGAATGTGATTTGGAGAAACCGGATACGATTGGATTGGCTTTAAGCAATGCATCAACAGTGATATGTACCATTGGTGCCAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTTTCGGATAGATTATCAGGCCACCAAAAATCTAATTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCACTGGGAACGAACAAAATTGGCTTCCCTGCTGCTATCCTCAATTTGTTTTGGGGAGTCCTTGTTTGGAAAAGGAAGGCAGAAGAAGCACTGGTGGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAGCGGCCTACAGATGCTTTCAAGGAAACTCATAATATAACCCTGTCAACCGAAGATACTTTATTTGGGGGTCTGGTGTCAAACCTTCAGATTGCTGAACTCTTGGCAGTCATAGCCAAGAATCGTGATCTATCATATTGTAAAATAGTGGAGGCAATTGCAGAGACAACTGCACCGCTGACTCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGTCCTTACATTTCTTCACCCAAGAAACCAGACATTCCAGCGCCCAGTATTCCAGATCCCCCTGCCAATGTTGTGACAGTGGAACCTAGTATTGCCACTGAGCAAGAAGCTTCACAACCTAAACCAGTGGCAAAACAGCCACTTTCTCCCTATACTGCTTATGATGATTTAAAGCCACCAACATCTCCTACACCATCTCAGCCCGGTAGTGAGAAACAAGCAAAGATCAGTGAGACAGTGGAAAAACCAAGTGTTTCGGATACTCCAAGTAGTGTGCCAGGAGTAGATGGCATCACTCAGGCAACATCTTCACCCAAAGTGGAGAAGCCTCTTTCTCCTTATGCAGCATATCCTGACTTAAAACCTCCCACTTCACCATCTCCTAATGCACCAGTTGTATCAGTTTCCACATCTGCTGCTGATGGTGTGCCACAGATAGACACAATATCAAGTAATGGAACACCACAACTTTCAACACCAGATGAACCAAAGGAAGAACATCTCCCCGAACCCAAGTCAAGACCACTGTCACCTTATACGATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGAAATTCCTAG 1653 0.4537 MDNIIKTKLHILNPPYPSTCLSMEAFSLQSLTLTTIPSSLSQRGATEKSSAHVNLSHFTRYPSSTTSTKHRIRCTTTQASGSTKSSVGTAEGISEETDSKDDNLVFVAGATGKVGSRTVRELIKLGFRVRAGVRSAQRAGALTKSVQELKLDGSSATGGGQAVEKLEIVECDLEKPDTIGLALSNASTVICTIGASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALVASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVIAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIPAPSIPDPPANVVTVEPSIATEQEASQPKPVAKQPLSPYTAYDDLKPPTSPTPSQPGSEKQAKISETVEKPSVSDTPSSVPGVDGITQATSSPKVEKPLSPYAAYPDLKPPTSPSPNAPVVSVSTSAADGVPQIDTISSNGTPQLSTPDEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSPSFRNS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0440 550 MobiDBLite consensus disorder prediction 419 459 - -
Vra2g0440 550 MobiDBLite consensus disorder prediction 360 374 - -
Vra2g0440 550 Pfam NAD(P)H-binding 109 320 IPR016040 -
Vra2g0440 550 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 23 491 IPR044719 -
Vra2g0440 550 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 492 548 IPR044719 -
Vra2g0440 550 MobiDBLite consensus disorder prediction 353 550 - -
Vra2g0440 550 CDD SDR_a5 105 315 - -
Vra2g0440 550 Gene3D - 101 352 - -
Vra2g0440 550 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 349 IPR036291 -
Vra2g0440 550 MobiDBLite consensus disorder prediction 380 394 - -
Vra2g0440 550 MobiDBLite consensus disorder prediction 482 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0440 Vra-Chr2 3443231 3447664 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0440 - - gmx:100779056 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0440 2 3443231 3447664 Vra2g0440 2 3443231 3447664 ECH