LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0438	ATGGAAATATCTAGCATATGGATAAAGAAACTGGTGTGGTCGTTATGGGTCACACGCAGAGAGCTAATCACGAATCCTCAACAGAGAGTGTTCCCAAAGTTTGGATCCATGAAGGCTTTCAGTGTCATAAATTCCACAAATCCATGTCTTCCCAATACCCATTTCCTCAAAGTCCCTATCTTTCATCCCTTCTTCAAATTCAATCCATTCGGCCATGCTGCAAACAGAGCTCACAAGCTTCCATTCACCATCAGCTGCAAGCTGAAAAGCTCCCAAGATGTCGAAAACAAAGGGAAGAGCGTGTCCCAGAAGATTATCTTATCAGAAGCTTCCTCTCCACCTCTCACTGAGGATGATGCCACCAATGGTGACACTGGGGAAGTTCCACAGAGCTCAAAGAAAAAAAAGGGAGGCCCTTTTGGTTTGCTCAACATGCTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCATTGGCTATTGCGGACATGTTTGCTGCTGCTGCTTTGATGGCTTTGGGAACAATTATTGAACAAGGTGAAGCTCCTGACTTTTATTTCCAGAAATACCCTGAAGATGATCCTGTGTTTGGATTTTTTACTTGGAGATGGATTCTCGCCCTTGGTTTTGATCACATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACATACACAACTCAACTCCCCCTCATCACGGTTTCAAGAAGATGGTCATTTTTGCATTCTGCCGAGGCTATACGCAAGCAAGAATTTTCAGAGTCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTCTTTTGATGGGATCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCCTTTAAAGGACTTGCAGGTAGGTTGGCCCCTGTTGGAGTTCATATAGCACTGTTACTTGTAATGGCTGGAGGAACTGTTAGTGCTGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGCCTGAATTTTGTTGTTGGTGATGTTCTGGTTCCTTCTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCTACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAGACAATCAGTGTAAATGATCCTTTAAGATACGGTGGTATCACCATATATCAAACAGATTGGAGTATTTCGGCTCTGCAAATTCTTAAGGATAATGAAGGACCGTATAACTTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTACAATCAATCGTCCTTTATGATAAAGAAGGAAAATTTGTGGGAGTTAGACGCCCTAATTCGAAGCTCCCAATCAATATTGATGGATCAGAAATTGTAATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGATCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTGATGATCACTACTTGCATCAGCTATTTATCTCATTCGCAGATATGGGCTTTACAAGATGGAACAACAGTCGTCATTGGAGGAAAGACTAACAGAGCAAAGATGGAGTTTCCGGAGGAGATGAACCTCTTACTTGATAAAGTCCCTGAAATTGTTGAATCAACTCTGTCTAAGCAAGCTGATAGCATTAGTGGTTAG	1788	0.4284	MEISSIWIKKLVWSLWVTRRELITNPQQRVFPKFGSMKAFSVINSTNPCLPNTHFLKVPIFHPFFKFNPFGHAANRAHKLPFTISCKLKSSQDVENKGKSVSQKIILSEASSPPLTEDDATNGDTGEVPQSSKKKKGGPFGLLNMLRRKTLQILSSLPLAIADMFAAAALMALGTIIEQGEAPDFYFQKYPEDDPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMACTYTTQLPLITVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTLLMGSGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLVPSGFLSSPTEAFNTEIHVNRFYMDYYESGEVSQFYTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFVGVRRPNSKLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVVIGGKTNRAKMEFPEEMNLLLDKVPEIVESTLSKQADSISG*	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g0438	595	PANTHER	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	111	584	IPR023494	-
	Vra2g0438	595	Pfam	ResB-like family	159	422	IPR007816	-
	Vra2g0438	595	Pfam	ResB-like family	459	571	IPR007816	-
	Vra2g0438	595	Hamap	Cytochrome c biogenesis protein Ccs1 [ccs1].	147	576	IPR023494	-
	Vra2g0438	595	MobiDBLite	consensus disorder prediction	112	128	-	-
	Vra2g0438	595	MobiDBLite	consensus disorder prediction	112	136	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0438	60	590	Miscellaneous Gene Families	AT1G49380	67.096	0.0	756

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0438	K07399		-	gmx:100807003	979.163

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra2g0438	2	3415324	3420369	Vra2g0438	2	3415324	3420369	ECH