Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0431 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAACCCAAACTCTCTACGCAAATCCAGGGTTCTAACCGCAGTTGCAATTGGCTTCCTTATTGGATGCGTCTTCGCTTTCTTGTACCCCAATGGCTTCTTCGTTTCTGACTCTGTCGCTGCTAATCGCCGCCTCTCTCACGCGGGATCCATAACCCAGGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACCTGTTGAAATCAGAATATGTAGCGGTATCAGAGAAGAATGCCGAGCTAAAGAAACAGGTGAGGGAATTGACTGAAAGGCTTCGCCTTGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACGCTAGGTAAACAGGTTAAGGCTGGACCCTTTGGTACAGTAAAGGGATTGAGAACTAACCCTACTGTTGTTCCTGATGAGTCTGTGAACTCGAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAACCGAGAGCTTATAGTTGGACTTGCAAACGCCAATGTAAAGGAGATGCTGGAGGTCTGGTTCACCAACATCAAGAGAGTTGGCATAACCAACTATCTAGTTGTTGCTTTAGACGATGAGATTGTGAAGTTTTGCGAATCAAATCAAGTGCCAGTGTATAAAAGAGATCCAGAAGATAGTGTTGATGCAATTGGAAGAATCGGGAGTAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATACAGTGTTCTTCTATCAGATGTAGACATTGTATATTTGCAGAATCCATTTGATCATCTATACCGGGATTCAGACGTGGAGTCCATGAGCGATGGTCACAATAACATGACAGCATACGGCTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTAGATTTGCACATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATTAGACCAACAATCCCTTCGATCGAGCTTTTGGATCGCGTGGCAACACGACTTTCGAAAGAGAAGGCTTGGGACCAGGCTGTTTTCAACGAGGAACTCTTTTACCCTTCACATCCTGGTTATGATGGGCTTCATGCTTCCAGAAGAACTATGGATATGTATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAGCCTGTAATTATTCATGTGAATTATCACCCTGATAAACTTCCCCGAATGAAAGCAATTGTTCAGTATTACGTTGATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGATGGCTCAAATTGA 1314 0.4384 MIGRRDREGPLMRNNNPNSLRKSRVLTAVAIGFLIGCVFAFLYPNGFFVSDSVAANRRLSHAGSITQENSAGCESSDRVNLLKSEYVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQVKAGPFGTVKGLRTNPTVVPDESVNSRLGKILEKVAVNRELIVGLANANVKEMLEVWFTNIKRVGITNYLVVALDDEIVKFCESNQVPVYKRDPEDSVDAIGRIGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARFAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYDGLHASRRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVQYYVDGKQDALKPFPDGSN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0431 437 PANTHER ARABINOSYLTRANSFERASE RRA3 14 435 IPR044290 GO:0016757|GO:0080147
Vra2g0431 437 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 14 435 - -
Vra2g0431 437 Coils Coil 79 120 - -
Vra2g0431 437 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Vra2g0431 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 368 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0431 Vra-Chr2 3362323 3364980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0431 K20783 - gmx:100804189 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0431 2 3362323 3364980 Vra2g0431 2 3362323 3364980 ECH