Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0424 ATGGGCGAAAAATATAAGCCGTGGATCATCTTTCTTCTTCTACTGATAATCACGCGTTCTAGAGCCAGGGAATTGGTTGGAAGTGGAGCAGTAAACAAAATCTTGGAAGCAATCTCTGATGAGAATCATGAAACAGTGCACACAGAACATGAACATGCACATGTTCATTCCCACATGGATCACATGGACCCTTCTGTGATGGTGTTCCTCACCTTTGAAGATTTGAAGGTTGGAAAAACAATGGCAGTTTATTTTCCCAAGAGGGACCCTGCAACCTCCCCCAAGTTATGGCCGAGAGAAGAAGCTGAGTCACTCCCTTTCTCATTGAACGAACTCCCATACCTCCTGAAAATCTTCTCTTTTTCTCCAAACTCTCCCCAAGCAAAAGCCATGGAAGACACCCTGAGGGAATGTGAGAGTAAAGCCATCAAAGGAGAGGTAAAGTTCTGCGCCACCTCTTTAGAATCAATGCTTGACTTTGCTCAAACCATTCTTGGCTTCACACACGAACTTCAAGTTTTCACCACCTCCCACCAAACCAAATCCAGTGTCACTTTCCAAAACTACACTTTCGAAAACATAGTAGAGATCCCAGCTTCCAAGATGGTGGCTTGCCACACCATGCCTTACCCTTATGCTGTTTTCTACTGTCACAGCCAAGAAAGTGAGAACAAGATGTATAAGGTGGCGCTTGGTGGTGAAAACGGGGATAGGGTGGAAGCTATGGTTGTTTGTCACATGGATACCTCCCATTGGGGTCATGGTCATGTTTCATTTCAAGTTCTCAAGGTTGAACCAGGAACCACTTCTGTGTGCCACTTTTTCCCAGCAGATAATCTCATCTTGGTTCCCAAACCTGAACAGCACGGTCTTGCAACCATGTGA 885 0.452 MGEKYKPWIIFLLLLIITRSRARELVGSGAVNKILEAISDENHETVHTEHEHAHVHSHMDHMDPSVMVFLTFEDLKVGKTMAVYFPKRDPATSPKLWPREEAESLPFSLNELPYLLKIFSFSPNSPQAKAMEDTLRECESKAIKGEVKFCATSLESMLDFAQTILGFTHELQVFTTSHQTKSSVTFQNYTFENIVEIPASKMVACHTMPYPYAVFYCHSQESENKMYKVALGGENGDRVEAMVVCHMDTSHWGHGHVSFQVLKVEPGTTSVCHFFPADNLILVPKPEQHGLATM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0424 294 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 20 286 IPR044816 -
Vra2g0424 294 Pfam BURP domain 69 283 IPR004873 -
Vra2g0424 294 ProSiteProfiles BURP domain profile. 69 285 IPR004873 -
Vra2g0424 294 PANTHER BURP DOMAIN PROTEIN USPL1 20 286 - -
Vra2g0424 294 SMART BURP_2 67 285 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0424 Vra-Chr2 3295645 3296993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0424 - - gmx:100800777 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0424 2 3295645 3296993 Vra2g0424 2 3295645 3296993 ECH