Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0417 ATGGACGAGAAGCTCATACAGCGGTTAGAATCGGCGGTGTCGCGCTTAGAGTCGCTCTCCGCCGGATTCCAACCATCGGCCTCGCCGGCCAGCACCGGCGACGATGCGGTGCGCGATCCGTCCGTCGTTGCGTTCGCCGATCTGATCGACCAGTACGTCGCTAGGTTTTCCCGCGCTGCGGAGGTTATCGGAGGACAGGTCTTGGATGTGTCGAAACTTGTGCAGGAAGCTTTCAATGTTCAGAAAGAACTTTTGATTGAGCTCAAACAAACACAGAAGCCTGACCTTGCTGGGTTGGGTTCATTTCTCAAACCATTGAATGAAGTGATCACGAAAGCTGGCAAATTGACAGAGGGAAGGAGATCTGATTTTTTTAATCACTTGAAGGCTGCTGCTGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGATTGTGGCATGAGTATGCCAATTGCGCATGTGGAAGAAAGCTGGCAAATGGCTGAGTTTTACTGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAATGGGCAAAAGCTCTTAAAGAGATGTATCTACCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTGGGCCCTGTTTGGAGTCCAAAAGGAAAAGTATATGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTGCCGCCCCTCCCCCTCCATCTGCTTCTCTATTTAGTTCTCAATCATCTCAGGCTTCATCTTCTAAACCTAAAGAGGGCATGTCAGCTGTTTTTCAGCAAATCAGTGAAGGAAACGTCACTTCAGGTTTGAGAAAGGTTACGGCTGATATGAAAACTAAGAATCGCGCCGATAGAACTGGAGTTGTTGGCACTATTGAAAAAGAAAGTCATGCAACTTCACGTGTGCCTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGCCGCAAATGGGTTGTTGAAAATCAAATTGAAAAGAAAGATTTGGTCATTGGAGATTGTGATGCAAAACAGTCTGTATATGTTTATGGATGCAAAAACTCTGTTTTGCAGATTCCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATTTGAGATTGTAAACAGTAGTGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTTAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGCAAAGACTCTTTACAAACATCCATAACTACAGCGAAGTCAAGCGAGGTCAATGTCTTGGTTCCTAGTGCTGAAACCGATGGTGACTGGGTGGAGCATTCTTTGCCACAACAATACATTCATGTGTTCAAGGATGGACATTTTGAAACAACACCTGCTTCTCATTCTGGAGGTTAA 1413 0.4529 MDEKLIQRLESAVSRLESLSAGFQPSASPASTGDDAVRDPSVVAFADLIDQYVARFSRAAEVIGGQVLDVSKLVQEAFNVQKELLIELKQTQKPDLAGLGSFLKPLNEVITKAGKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYCNKVLVEYRNKDPNHVEWAKALKEMYLPGLRDYVKSFHPLGPVWSPKGKVYAPSKASAPAAPAAPPPPSASLFSSQSSQASSSKPKEGMSAVFQQISEGNVTSGLRKVTADMKTKNRADRTGVVGTIEKESHATSRVPSKAGPPKFELQMGRKWVVENQIEKKDLVIGDCDAKQSVYVYGCKNSVLQIPGKVNNITIDKCTKMGVVFKDVVAAFEIVNSSGVEVQCQGAAPTILVDNTSGCQLYLSKDSLQTSITTAKSSEVNVLVPSAETDGDWVEHSLPQQYIHVFKDGHFETTPASHSGG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0417 470 ProSiteProfiles C-CAP/cofactor C-like domain profile. 310 447 IPR017901 -
Vra2g0417 470 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 310 469 IPR036223 -
Vra2g0417 470 MobiDBLite consensus disorder prediction 277 293 - -
Vra2g0417 470 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Vra2g0417 470 Gene3D - 41 216 IPR036222 -
Vra2g0417 470 MobiDBLite consensus disorder prediction 221 256 - -
Vra2g0417 470 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 41 235 IPR036222 -
Vra2g0417 470 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 469 IPR001837 GO:0003779|GO:0007010
Vra2g0417 470 MobiDBLite consensus disorder prediction 271 311 - -
Vra2g0417 470 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 469 - -
Vra2g0417 470 Pfam Adenylate cyclase associated (CAP) N terminal 3 57 IPR013992 GO:0003779|GO:0007010
Vra2g0417 470 Gene3D - 309 469 IPR016098 -
Vra2g0417 470 Pfam Adenylate cyclase associated (CAP) C terminal 310 467 IPR013912 GO:0003779|GO:0007010
Vra2g0417 470 MobiDBLite consensus disorder prediction 237 256 - -
Vra2g0417 470 SMART carp 348 385 IPR006599 -
Vra2g0417 470 SMART carp 386 423 IPR006599 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0417 K17261 - gmx:100793194 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0417 2 3240092 3244331 Vra2g0417 2 3240092 3244331 ECH