Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0403 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAAAAGTGGCAGGAATTTGCGAAGCTATTTCAATATTATCTGGATAAATCCACGCCACACGCAACGTATAGATGGATTGGGAGTTTGGTTATTGTGTCGATCTTTGTTTTGCGGGTTTTATATGTCCAGGGATTTTACATCGTGTCTTATGGATTGGGCATCTACCTGCTGAATCTGTTGATTGGGTTTCTGTCACCGTTGGTCGATCCTGAGCTGGAGCCTTCTGATGGGCCTGTGCTGCCGACTAAAGGTTCTGACGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTATGATGACTTTCTTTTCTGTGTTTGATGTTCCTGTGTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTTACTATGAGGCGCCAAATTGCACACATGATCAAATACAAATACATACCATTCAACATTGGAAAGCAGAAGTATACTGGCAAAAGATCCTCTGCAAGTAGCAGTGGCAGTCGTGCAGACTGA 585 0.4479 MEGTGGSSASAAAPVNQKWQEFAKLFQYYLDKSTPHATYRWIGSLVIVSIFVLRVLYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPVLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFMMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYKYIPFNIGKQKYTGKRSSASSSGSRAD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0403 194 Pfam Rer1 family 19 180 IPR004932 GO:0016021
Vra2g0403 194 PANTHER PROTEIN RER1 1 190 IPR004932 GO:0016021
Vra2g0403 194 PANTHER PROTEIN RER1A 1 190 - -
Vra2g0403 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0403 Vra-Chr2 3121303 3124274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0403 1 194 Miscellaneous Gene Families AT2G21600 78.462 2.59e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0403 - - gmx:100817031 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0403 2 3121303 3124274 Vra2g0403 2 3121303 3124274 ECH