Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0400 ATGGCAACCTCACAGTTGAACTCAAAATCCCATTTCCATGCTCGTTCAAACAGCTTACCCTCTAGACCACACCCACTTATCCTGCAATGCAATGAGCACTTGGACAGGTTAAAGGCTTCCCATGAAACCTCCTCTTCCTCTTCAACCCTTAGCCACAAGCTAGGAGGGTTGCAAGATCTACATGAATGTGTAGAAAATTTGTTCCAGCTTCCCCTCACTCAAGAAGCACTTCACCGTGAGAGTCAAGAAAACTGGGTGGATGAGCTTCTGAATGGATCCTTAAGGCTCTTAGATGTGTGTACAACCGCCAAAGACTCTCTACTGCACACAAAAGAGTGCATGAGAGAACTTCAATCGATTATGAGAAGGAGAAAGGGGGGTGAAGTAGAGCTCAGATCAGAGATCAAGAAGTTCTTGACTTCAAGAAAGGTGGTCAAAAAGGCCATCTCAAAAGCCTTGGCGAATTTGAAGGGTACCCCAAGAAAATGCAGCATGTCACCTGCAAACAAAGATAACCAAACAGTAGCTTTGGTTAATTTAATGGAGAACGTGGAAGTGGTCACTCTATCAGCATTTCAGACACTACTTCATTTGATCTCAGGGAGTGCACAATCAAAGTCAAGCAGCTGGATTTTGGTTTCCAAGCTAATGCAGACGAAGAAAGTGGGGTGCTCAAAGTTGGCAGATGAATGTGAATTTGCTCAACTTGATGAAGCATTGCAGTCCTGCATGTTTTCTCATACAAGTAAATCTGATAACATGAGTAGACTGCAAAACCAGTTGGAGAAAGTAGAGTCGCTTGTTCAAGATCTTGAAGAAGGTTTTGAATTTCTGTTTAGGCGTTTGATAAAGACCAGAGTTTCCCTTCTTAACATCCTCAATCACTAG 888 0.4302 MATSQLNSKSHFHARSNSLPSRPHPLILQCNEHLDRLKASHETSSSSSTLSHKLGGLQDLHECVENLFQLPLTQEALHRESQENWVDELLNGSLRLLDVCTTAKDSLLHTKECMRELQSIMRRRKGGEVELRSEIKKFLTSRKVVKKAISKALANLKGTPRKCSMSPANKDNQTVALVNLMENVEVVTLSAFQTLLHLISGSAQSKSSSWILVSKLMQTKKVGCSKLADECEFAQLDEALQSCMFSHTSKSDNMSRLQNQLEKVESLVQDLEEGFEFLFRRLIKTRVSLLNILNH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0400 295 Pfam Protein BPS1 53 292 IPR004320 GO:0048364|GO:0048367
Vra2g0400 295 PANTHER DUF241 DOMAIN PROTEIN 1 294 - -
Vra2g0400 295 MobiDBLite consensus disorder prediction 1 25 - -
Vra2g0400 295 MobiDBLite consensus disorder prediction 1 17 - -
Vra2g0400 295 PANTHER BPS1-LIKE PROTEIN 1 294 - -
Vra2g0400 295 Coils Coil 247 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0400 Vra-Chr2 3098975 3100236 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0400 - - gmx:100802945 476.478