Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0385 ATGCTTGTGTTGTTTGAAACTCCTGCGGGGTTTGCCCTGTTTAAAGTTCTGGATGAAGGCAAGCTTTCAAAAGTTGAGGACTTGTGGAAGGACTTTTCCAGTGCAGACACTGCTAGACAGGTTGTCAAGTTGAAAGCGTTTTCTAAGTTCGAGAACACTTCAGAAGCTCTAGAAGCAGCGACTTTACTAATTGATGGAAAAGCAAGCAAGGGTCTGCGTAAGTTCTTGCGTGTTCATTGTGAAAATGAAACACTTGGTGTGGCCGATTCAAAACTTGGGAATGTGATTAAAGAGAAATTGAAAATCGATTGTATTCACAACAATGCAGTCATGGAGTTGATGAGAGGTGTCAGAAATCAGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCTCCAATGAGCCTGGGTTTATCCCATAGCTTATCCAGATACAAGTTGAAGTTTAGCGCAGATAAGGTGGACACCATGATTGTACAAGCTATTGGTTTACTTGATGATCTTGACAAAGAGTTGAATACATATGCCATGAGGGTTCGTGAATGGTATGGTTGGCATTTTCCCGAACTGACTAAAATAGTACAAGATAACATCCAATATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGTCAATGCAGCTGAGCTTGATTTCTCTGAGATTTTGTCTGAGGAAGTGGAGGCAGAACTTAAGGAGGCAGCTGTAATATCTATGGGAACTGAAATCGGTGATCTTGATTTGACAAATATTAGGGAACTCTGTGACCAGGTTTTGGCTCTTTCGGAATACAGGGCACAACTATATGATTATCTAAAGAGCAGGATGAACACCATTGCACCCAATTTGACTGCGATGGTTGGGGAGCTTGTTGGTGCTCGTCTCATTGCCCACGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGCACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTCAGGGCACTGAAAACTAAGCATGCTACTCCCAAGTATGGTCTTATATACCATGCATCTTTGATTGGTCAGGCAGCTGCAAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACAGCATTGGCTATTAGGTGTGACGCACTTGGAGATGGCCAAGACAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAGGCGCGATTGAGGAATCTTGAAGGCAAAGAGTTGGGCCGTTTTGCCGGTTCTGCTAAGGGAAAACCTAAGATAGAAGCATATGACAAGGACAGAAAGAAAGGAGCGGGAGGACTGATTACCCCGGCTAAGACATATAATGCTTCGGCTGATTCAGTTATCGGGCAAATTGTCAATTCCGCTATGGATGAGGATAAACAAGAGGCTTCTGTTGCTGATAAAAAGAAAGAAAAGAAGGAAAAGAAGAAAAAGAAGGGGAAAAATGAAGAGGAACCAACTGTTGAAGCTGATGTTGCTGAGGAGCCAGAACCCGAAGTTGAGAAGAAAGAAAAGAAGAAGAAAAGGAAGGAGGCTAGTGAGAGTACTGAGTTGCAGAATGGGAATGGCGACTTGAATGCTGGAGAGAAGAAGAAAAAACGGAAAAAGCATGCAGAGCAAGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGGAAAAAAAAGAAAACTGAAAACTAA 1665 0.4318 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVQDNIQYARAVKLMGDRVNAAELDFSEILSEEVEAELKEAAVISMGTEIGDLDLTNIRELCDQVLALSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNASADSVIGQIVNSAMDEDKQEASVADKKKEKKEKKKKKGKNEEEPTVEADVAEEPEPEVEKKEKKKKRKEASESTELQNGNGDLNAGEKKKKRKKHAEQEESPEMPSKKKGKKKKTEN* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0385 554 MobiDBLite consensus disorder prediction 491 510 - -
Vra2g0385 554 MobiDBLite consensus disorder prediction 451 554 - -
Vra2g0385 554 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Vra2g0385 554 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Vra2g0385 554 SUPERFAMILY Nop domain 153 397 IPR036070 -
Vra2g0385 554 MobiDBLite consensus disorder prediction 521 554 - -
Vra2g0385 554 SMART NOSIC_2 159 211 IPR012976 -
Vra2g0385 554 Gene3D - 129 284 - -
Vra2g0385 554 Gene3D Nop domain 285 397 IPR042239 -
Vra2g0385 554 PANTHER NUCLEOLAR PROTEIN 58 1 552 - -
Vra2g0385 554 Coils Coil 451 480 - -
Vra2g0385 554 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Vra2g0385 554 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 552 IPR045056 GO:0030515|GO:0031428|GO:0032040
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0385 Vra-Chr2 2977942 2982251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0385 K14565 - gmx:100775301 899.042