Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0372 ATGGCCTCGTCCTCACGTGCAAGGAGCAGCTCGCCATTTTCGCACCGCAAACCCTCTACTCCTCACTCCTCATCCTCATCCACTTCTTCCGTCACCAACGGACGCGTAATGCCTCGCTCCTGTTCTTCTTCCACGTCGTCGTTTTACAACTCCGGCGGCGGTGGCGGTCCGTCCATGACTCCGAGTCGCGGTCGCAGCGATTCAATCGGCTATGGTTACGGTAATCCTTCGCCGGTGGAGTTCGGAATGGAGGACGAGGTGATCATGGAGCCGGTGGATCCTTCCAGGTCTCGGGATAGCATTTCGGTCACGATTCGGTTCAGACCGTTGAGTGAAAGAGAGTACCATAGAGGAGACGAGATCGCGTGGTATGCGGATGGTGACAAGATTGTGAGAAACGAGTATAATCCAGCTACTGCTTATGCATTTGATAGAGTGTTCGGACCGCATACAAATTCCGACGAGGTGTACGAAGTAGCTGCCAAACCTGTTGTGAAGTCTGCCATGGATGGTGTAAACGGAACTGTGTTTGCATACGGTGTGACGAGTAGTGGTAAGACACATACTATGCATGGAGACCAGAATTGTCCTGGTATCATACCGCTGGCTATCAAAGATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTACTCCGAGTTTCCTATCTAGAAATATATAATGAGGTGATAAATGATTTGCTCGACCCTACTGGCCAAAATTTACGTGTTAGAGAAGATGCACAGGGAACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCACCTGGACATGCCCTTTCCTTTATTGCTGCTGGGGAAGAGCATCGTCATGTTGGATCAAATAATTTTAATCTTTTCAGCAGCCGAAGTCACACAATTTTTACACTTATGATTGAAAGCAGTGCCCACGGTGAAGATTATGATGGAGTGGTCTTCTCTCAGCTTAACTTGATCGATCTTGCGGGATCCGAGAGCTCAAAAACTGAAACTACTGGATTAAGAAGAAAAGAAGGATCTTACATAAACAAAAGTCTTCTGACACTTGGAACAGTTATTGGAAAATTAAGTGAAGGGAAAGCATCTCATGTTCCATATCGTGACTCAAAGCTTACTCGCCTCCTGCAGTCTTCGCTTAGTGGGCATGGCCATGTTTCGCTTATTTGCACCGTAACTCCAGCATCCAGTAATATGGAAGAAACTCATAATACCTTGAAGTTTGCTAGCAGGGCAAAGAGAGTAGAGATATATGCCTCACGTAATAAGATTATTGACGAAAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCTGTCCTTAAACATGAACTTGATCAGCTTAAGAAGGGAATGCAACTTGGTGTTAATCACGAGGAGATCATGAGCTTAAAACAAAAGTTGGAAGAAGGTCAAGTTAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGCGAAGGTTGCTCTTATGAGTCGGATCCAGAAGCTAACAAAGCTCATTCTGGTTTCATCAAAGAATGCAATTCCGGGATATGTAACTGAAGCTACCAGTCACCATCAGAGTCACTCTGTTGGTGAGGATGATAATTATGATGCCCTACGTGATGGATCACTTTTGATTGAAAGTGAGAGTCAAAAAGATGTTTCCACTGTGTCATCTGATCTGTCTCATGATGTTAGACATATGAGATCGTCAAGTAGGCGGAATGAAGAACTCTCCCCAACTAGCAGTATCATCACTGAACCAATACGACTACCAGCGGGAGGGATGACAATGTCCGATGAGATGGATCTTCTTGTCGAGCAAGTCAAAATGCTTGCTGGAGATATCGCTTTCAGTACCAGCACTCTGAAACGCTTAATGGAGCAGTCTGTAAATGATCCTGAAAGCTCCAAAATACAGATTGAGAACTTAGAGCAAGAGATCCAAGCAAAAAGGAAGCAAATGAGCATTTTAGAGCAAAGAATAATTGAGAGTGGTGAATCTTCCGTAGCTAACTCATCTCTGATTGAAATGCAGCAGACAATCTCAAGATTAATGACGCAGTGTGATGAAAAGGCCTTTGAGCTAGAGATAAAATCGGCAGACAACCGTGTCCTTCAAGAACAGTTAGATAATAAGTGTTCTGAAAATAGAGAATTGCAGGAAAAGGTGAAGCTGCTAGAACAGCAACTTGCAGCAGTCCCAATTGGTACCTCGTTAATGCTTGCTGATCAGTGTACATTTGGAGAACACATTGATGAGCTGAAAAGGAAAATACAATTCCAGGAGATTGAAAACGAAAAGCTGAAGCTCGAACAGGTTCAATTATCAGAAGAGAACAGCGGGTTGCATGTTCAGAATCAGAAACTCTCTGAAGAGGCTTCTTATGCCAAAGAACTGGCTTCTGCTGCTGCTGTGGAGTTGAAAAATTTAGCTGGGGAAGTTACCAAACTTTCATTGCAGAACGCAAAATTGGAAAAGGAATTGATTGCTGCACGAGACCAGGCTAACACTCGAAATTCTGTTGTACAAACAGTTAATGGTGTTGGCCGCAAATACAATGATGCTAGATCTGGGAGGAAGGGGAGAATTTCTGGCCGTGCTAATGAAAATTTCGGAGTTGGTATGGATGAGTTTGAGTCATGGAATCTTGACGCTAATGATCTGAGGATGGAACTGCAAGCTAGGAGACAGCGAGAGGCAGCTCTTGAGGCTGCATTATCTGAGAAGGAATTTCTGGAAGACGAATACAGGAAAAAGGTTGAAGAGGCCAAAAAAAGAGAAGCCTCGCTGGAGAATGATTTAGCAAATATGTGGGTTCTTGTGGCTAAGTTAAAGAAAGAAGGGAATGCCACGCCGGAATCAAACAATGATACAAAAAAATGTGATGAGGACGTTCAAGTAGACGATCTGAAAACTAATGACATTGAAAGTAGTATTGTCCCCAAGGAGCAGGTTTTAGATATATCAATACAAGAAAATGAAATAACCAATGAAGACCCTTTGGTTGTTCGTCTTAAGGCACGCATGCAAGAGATGAGGGAAAAAGAATTCAGGCATCTTGGCAATGGAGATACAAATTCCCATGTTTGTAAAGTATGTTTTGAGTCGTCAACCGCAGCAATTCTTCTTCCATGCCGGCATTTTTGTCTGTGTAAATCTTGTTCACTCGCTTGTTCTGAATGTCCAATATGCCGCACAAATATTGCAGATAGGCTTTTTGCTTTTACTTCTTGA 3225 0.431 MASSSRARSSSPFSHRKPSTPHSSSSSTSSVTNGRVMPRSCSSSTSSFYNSGGGGGPSMTPSRGRSDSIGYGYGNPSPVEFGMEDEVIMEPVDPSRSRDSISVTIRFRPLSEREYHRGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKSAMDGVNGTVFAYGVTSSGKTHTMHGDQNCPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEDYDGVVFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKHELDQLKKGMQLGVNHEEIMSLKQKLEEGQVKMQSRLEEEEEAKVALMSRIQKLTKLILVSSKNAIPGYVTEATSHHQSHSVGEDDNYDALRDGSLLIESESQKDVSTVSSDLSHDVRHMRSSSRRNEELSPTSSIITEPIRLPAGGMTMSDEMDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPESSKIQIENLEQEIQAKRKQMSILEQRIIESGESSVANSSLIEMQQTISRLMTQCDEKAFELEIKSADNRVLQEQLDNKCSENRELQEKVKLLEQQLAAVPIGTSLMLADQCTFGEHIDELKRKIQFQEIENEKLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELIAARDQANTRNSVVQTVNGVGRKYNDARSGRKGRISGRANENFGVGMDEFESWNLDANDLRMELQARRQREAALEAALSEKEFLEDEYRKKVEEAKKREASLENDLANMWVLVAKLKKEGNATPESNNDTKKCDEDVQVDDLKTNDIESSIVPKEQVLDISIQENEITNEDPLVVRLKARMQEMREKEFRHLGNGDTNSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0372 1074 PANTHER CENTROMERE PROTEIN E 60 1034 - -
Vra2g0372 1074 ProSiteProfiles Kinesin motor domain profile. 100 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 SUPERFAMILY RING/U-box 1026 1066 - -
Vra2g0372 1074 Coils Coil 699 726 - -
Vra2g0372 1074 Coils Coil 892 930 - -
Vra2g0372 1074 MobiDBLite consensus disorder prediction 1 77 - -
Vra2g0372 1074 Coils Coil 433 453 - -
Vra2g0372 1074 MobiDBLite consensus disorder prediction 555 570 - -
Vra2g0372 1074 Pfam Zinc finger, C3HC4 type (RING finger) 1025 1066 - -
Vra2g0372 1074 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1001 1071 IPR013083 -
Vra2g0372 1074 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 60 1034 - -
Vra2g0372 1074 ProSiteProfiles Zinc finger RING-type profile. 1027 1062 IPR001841 -
Vra2g0372 1074 MobiDBLite consensus disorder prediction 545 577 - -
Vra2g0372 1074 Gene3D Kinesin motor domain 92 448 IPR036961 -
Vra2g0372 1074 Coils Coil 804 831 - -
Vra2g0372 1074 Coils Coil 748 775 - -
Vra2g0372 1074 Coils Coil 467 501 - -
Vra2g0372 1074 Coils Coil 637 657 - -
Vra2g0372 1074 MobiDBLite consensus disorder prediction 1 65 - -
Vra2g0372 1074 SMART kinesin_4 98 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 454 IPR027417 -
Vra2g0372 1074 CDD KISc_CENP_E 100 417 - -
Vra2g0372 1074 PRINTS Kinesin heavy chain signature 171 192 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 PRINTS Kinesin heavy chain signature 285 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 PRINTS Kinesin heavy chain signature 318 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 PRINTS Kinesin heavy chain signature 367 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 Pfam Kinesin motor domain 106 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra2g0372 1074 ProSitePatterns Kinesin motor domain signature. 317 328 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0372 Vra-Chr2 2874907 2886996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0372 35 1074 Miscellaneous Gene Families AT4G39050 71.130 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0372 K11498 - gmx:100800460 1795.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0372 2 2874907 2886996 Vra2g0372 2 2874907 2886996 ECH