Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0367 ATGGCATTCAAACTCAGATCACTACCTCTTCCTTACTCTCTTCACTCCTATACCCGCCAAAACCCTAATTTCACGCTTTCGAACCATCGTCTTCCTCGTCGTTTCTCTGCACCTTCTCTTCCTCTCAGTATCTCTCTCTCAACCACAGCTTTAGCATCCACGTTTCATCGCACTGCTGTCGTAACCGCTCGCGCTGTTCGAAGTGGTGAAATCGCCAACGAAGGCGAAGAAGGCAAAGATGAAGAATTATCGAGGCAGGGTGAGAAAAAGGAGCTAGTAAATCAAGGAATATGGAGTCAGATGAAGGACATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTCATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGCTCCGTTGAACTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCCATTGCTACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGATAAAGAAGAAGTACAACACTACATATCTGTCTTGCTTTTTGTTGGGTTATCTTGTGGCATCGCCATGCTTTTGTTCACTAGGCTATTTGGTGCTGCAATAATAACTGCTTTCATCGGACCAAAGAATGCACACGTAGTACCTGCAGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCATCGCCTGCCTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAAGCTTTGGCTGCTGCTAGTTTTATAAATATAAGTGGTTGTATAATTTTGTGCATCTATTTAGGCTACGGTATTGTAGGGGCAGCATGGGCTACAATGGTTTCACAAGTTATTGCTGCTTGCATGATGATTCACACTCTAAACATGAAGGGATATAATGCACTTGCTTTCTCCATTCCTTCAGGGAAGGAACTTTTGACGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTATTCACTCCTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACGTATTCCATGTGTACAGTATGGGGTGAACCTCTCTCTCAAACTGCTCAGTCATTTATGCCTGAACTGATATATGGAGTAAATCGGAGTTTATCAAAGGCCCGATTGCTTCTAAGGTCTCTTGTGATAATTGGAGTTATACTTGGCTTATTGTTAGGGATTGTTGGAACTTCAGTTCCTTGGTTATTTCCCTACATTTTTACACCTGATCGGATGGTCACCCAGGAGATGCATAAGGTGCTGATTCCATATTTTATAGCCCTTGCTATAACACCCCCTACTATCAGCCTCGAGGGAACATTGCTGGCTGGGCGGGATCTGAGATTTATAAGTTTGTCAATGGTTGGATGCTTTTGCGTGGGTTCACTAGTATTATGGGCCTTGAGTAGTAGATTTGGCTTGCTAGGCTGCTGGTTTTCCCTGGCAATATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAACGGCGTTTTATACTCCGAAGATACAGACCGGTATGAGCTGCTAAAGCTAAGGACTGCCTAG 1635 0.4416 MAFKLRSLPLPYSLHSYTRQNPNFTLSNHRLPRRFSAPSLPLSISLSTTALASTFHRTAVVTARAVRSGEIANEGEEGKDEELSRQGEKKELVNQGIWSQMKDIVMFTGPATGLWICAPLMSLIDTAVIGQRSSVELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHYISVLLFVGLSCGIAMLLFTRLFGAAIITAFIGPKNAHVVPAASSYVKIRGLASPALLVGWVAQSASLGMKDSWGPLKALAAASFINISGCIILCIYLGYGIVGAAWATMVSQVIAACMMIHTLNMKGYNALAFSIPSGKELLTIFGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGVNRSLSKARLLLRSLVIIGVILGLLLGIVGTSVPWLFPYIFTPDRMVTQEMHKVLIPYFIALAITPPTISLEGTLLAGRDLRFISLSMVGCFCVGSLVLWALSSRFGLLGCWFSLAIFQWARFSMALQRLLSPNGVLYSEDTDRYELLKLRTA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0367 544 CDD MATE_DinF_like 100 514 IPR044644 -
Vra2g0367 544 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 70 533 - -
Vra2g0367 544 TIGRFAM matE: MATE efflux family protein 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra2g0367 544 Pfam MatE 116 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra2g0367 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 70 533 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0367 Vra-Chr2 2827702 2835659 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0367 K03327 - gmx:100778295 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0367 2 2827702 2835659 Vra2g0367 2 2827702 2835659 ECH