Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0352 ATGGGTGCTTTGGATCATATCTCCGACCTCTTCGACTGCTCCCACACCAGTTCCAAACTCAAGAAGAAGCGCAAACAATTCCAGACGGTGGAGGTGAAAGTGAAGATGGACTGTGAAGGGTGTGAGAGGAAGGTGAAGAAATCGGTGGAGGGAATGAAAGGGGTGACTCAGGTGGAGGTGGATCGGAAGGCTAGTAAGGTCACTGTTTCGGGCTACGTTGAACCCTCTAAGGTTGTGTCTCGCATCTCTCACCGCACCGGAAAGAGAGCGGAGCTGTGGCCGTATGTCCCGTACGACGTCGTTGCGCACCCTTACGCGCCCGGTGTCTACGACAAGAAAGCGCCCTCTGGGTACGTGCGAAACGCCGAAGTTGACCCTCGTCTGACTAACCTCGCACGTGCCAGCTCCACCGAGGTCAGGTACACCACCGCCTTCAGCGACGACAACCCCGCCGCATGTGTCGTCATGTGA 471 0.5648 MGALDHISDLFDCSHTSSKLKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQVEVDRKASKVTVSGYVEPSKVVSRISHRTGKRAELWPYVPYDVVAHPYAPGVYDKKAPSGYVRNAEVDPRLTNLARASSTEVRYTTAFSDDNPAACVVM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0352 156 CDD HMA 31 91 IPR006121 GO:0046872
Vra2g0352 156 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 156 - -
Vra2g0352 156 Pfam Heavy-metal-associated domain 32 88 IPR006121 GO:0046872
Vra2g0352 156 Gene3D - 24 91 - -
Vra2g0352 156 ProSiteProfiles Heavy-metal-associated domain profile. 36 83 IPR006121 GO:0046872
Vra2g0352 156 SUPERFAMILY HMA, heavy metal-associated domain 27 94 IPR036163 GO:0046872
Vra2g0352 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 156 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0352 Vra-Chr2 2691850 2692666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0352 - K10752 gmx:547973 308.916