Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0337 ATGATGGGTGGCAGCGAGGATCCGAACAACAAAGGCGATTCTCCATTCGAATCCTCGGCATCGCAACCCTTTCTGTCGAAACCCTCGTACCCTTCTTCGGCATCTTCGGCGGTGGAAGAAGAATCGGAGTCAAACCAGCAATACCTTCACATCACTTACAATTCGGGTCCTCGCTCCTTCAAGGACCTCCCTTTCCTCATCCTCTTCCTTCTCTTCGTCATCTCCACCTTCGCCTTCGGCATCTTCGCCGTCTTCCACCGGAACACCGACTACCTCTCTCTCTCATCTTTCTCCTACGACGCCACCTCCTCCTCCTGCGTCCTAAATCCTTCTTCCTCTTCTTCCTCCCTTTCCTCGTGGCTTTCCCTCGATTCTTCCTCGCACTTGGTCAAGGGTCTCATATGGACCCTCGTCATCACCTTCGTTCTTAGCATCCCCTTGTGCTGGGCTTTGCTTCTCTTACTCAAGCATTACACCAAACAAATTGTCTACGCTGCGATTCCCTTCTTCATCGCCATCCCTATTTTCCTCAACGTCTATTGGTTCGTCGCATGCACCCTCCGCTCGTCTTGCAGCACCGCCTTCCCCCTCGCTTATCGGGTTGTCGTGATGGTCTTCGTCTTCTTGGTGATTGGGGCCGTCGTGTGGATCTTGGTCGTGAATTGGCATCGCGTGGAGCTCACTATCAGCATAATCGGGGTCGCTTCCCACGCACTTTCCAGGAATTTGAACTTGTTCGGGGTGCTGCCTTGTTTGATCGTCGGGCTTCTCGCGTATTACGTGCCAATAGTGGTTTTCATGGTGTTTTCGAGGTTTAATGGGAAGATTGCGGTGAAGAATTTGACGAGCGGATATGCTTGTGTGTGGAAGGAAGATTCATGGGTTCCTGCTTATTTTGCTTTGGCTATTCTCACCATGTTGTGGTCTGCGGCAGTTACGGTTGAAGCTCAAGTTTATGTCATCAGTGGCACCATAGCTAATTGGTATTTCTCTAAGGATCATGAAACTCCTAAGCGGAGTATTCGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGCACCATATGTTTGTCGGGGTTGCTTATCTTTGTTGTTCGAATGGTGCGTTCTGCGGTTGACAGTGCAAGACAAGAGGATATTCCCGGGATAGTGAACCTTGTTCTGCGGTGCTGTGTAAACGCCTTACTGACAGCAGTTGACTTTCTCAACAAGTTCACCGTAAACTTTGCTGCAATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACATATGAACTACTGAGACGCAATCTTCTCTCTGCTGTTTTCGTGGAGACAATCTCATCTCGTATTCTGGCGGGAATCGTTTTTGTCTTTTCTGCAACATACACAATAGTGGCCTGTGTTATCTTAAAAGCTGGTACCAATCTTGGGACTGATTCTTATTTTGTGGCTGCAATGGCATGGGTGCTACTGATAGTAGTGTTGGGTTACCTGGTGCATGTGCTAGACAATGTAATCGACACAATTTACATCTGCTATGCGATAGACCGTGATAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTTTACGTTCACCTACCCATTAGTAGAAGTCTCAGACAATCTGTTACCCCAAGGACTCTAGGTGTGTAA 1644 0.4836 MMGGSEDPNNKGDSPFESSASQPFLSKPSYPSSASSAVEEESESNQQYLHITYNSGPRSFKDLPFLILFLLFVISTFAFGIFAVFHRNTDYLSLSSFSYDATSSSCVLNPSSSSSSLSSWLSLDSSSHLVKGLIWTLVITFVLSIPLCWALLLLLKHYTKQIVYAAIPFFIAIPIFLNVYWFVACTLRSSCSTAFPLAYRVVVMVFVFLVIGAVVWILVVNWHRVELTISIIGVASHALSRNLNLFGVLPCLIVGLLAYYVPIVVFMVFSRFNGKIAVKNLTSGYACVWKEDSWVPAYFALAILTMLWSAAVTVEAQVYVISGTIANWYFSKDHETPKRSIRTSLRNAFGPSSGTICLSGLLIFVVRMVRSAVDSARQEDIPGIVNLVLRCCVNALLTAVDFLNKFTVNFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSATYTIVACVILKAGTNLGTDSYFVAAMAWVLLIVVLGYLVHVLDNVIDTIYICYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSVTPRTLGV* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0337 547 Pfam Plasma-membrane choline transporter 206 514 IPR007603 GO:0022857|GO:0055085
Vra2g0337 547 MobiDBLite consensus disorder prediction 11 37 - -
Vra2g0337 547 PANTHER CTL-LIKE PROTEIN DDB_G0288717 48 528 - -
Vra2g0337 547 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 48 528 IPR007603 GO:0022857|GO:0055085
Vra2g0337 547 MobiDBLite consensus disorder prediction 1 37 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0337 - - gmx:100801313 880.552