LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0332	ATGGCATCGGATAAGGTGGTGGAAACTGTAATAGCAGGGAACTACGTGGAAATGGAAACCGAAGGACACCCGAAGGACGTAAAATCAAGGTTGTCTAGCTTCTTGTGGCACGGTGGTTCTGTTTATGATGCTTGGTTCAGCTGTGCTTCCAACCAGGTGGCTCAAGTGCTGCTTACGCTGCCATACTCATTTTCCCAGCTGGGAATGCTTTCTGGCATTCTTTTTCAACTCTTCTACGGTTTACTTGGTAGCTGGACGGCTTACCTGATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAGAGAGAAAAAGTTAACTTCAGAAACCATGTCATCCAGTGGTTTGAAGTTCTTGACGGGCTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTCATACAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAACCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGTCAGATGGAAGGAGTTAAGCATTCGGGTCCGACCAGATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAGTTCAAGGCTATATATTTATTGGCAACCCTGTATGTGCTGACACTGACGCTTCCATCTGCAGCAGCAGTGTATTGGGCATTCGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTTCTTCCAAAATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATAACATTCGGGTTTGCATGCACCCCATTGTACTTTGTTTGGGAGAAAGCAATAGGGATGCATGAGTGCAAGAGCTTATGCAAACGTGCTTTGGTGAGATTGCCAGTGGTGATCCCTATATGGTTTTTGGCCATCATCTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATCTTCACCTTCAAATCATCCTCTGCCAGACAGAATGCGGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTTGGAACCTTTATCATCAACTCGTTTGTGGTGGTGTGGGTGCTTGTGGTAGGGTTTGGATTTGGTGGGTGGGCCAGCATGGTTAACTTCATACACCAGATCGACACGTTTGGACTCTTCACAAAGTGTTACCAATGCCCTCCACCGCTTCTGCCACCTATGCCGCCGCAGCAGCTCAATGCCACCGCGCCTTCGCCGCTTCACCACCCTCATCACGGCCACTGA	1467	0.4778	MASDKVVETVIAGNYVEMETEGHPKDVKSRLSSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQMEGVKHSGPTRLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFIINSFVVVWVLVVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPLLPPMPPQQLNATAPSPLHHPHHGH*	489

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g0332	488	PANTHER	OS05G0424000 PROTEIN-RELATED	3	468	-	-
	Vra2g0332	488	Pfam	Transmembrane amino acid transporter protein	37	429	IPR013057	-
	Vra2g0332	488	PANTHER	AUXIN TRANSPORTER-LIKE PROTEIN 2	3	468	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g0332	Vra-Chr2	2535431	2539713	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0332	4	460	Organic Solute Cotransporters	AT2G21050	89.059	0.0	866

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0332	K13946		-	gmx:100812002	969.918